Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CTV-D1 nonfunctional coat protein gene, complete sequence.

ACC No: FJ001819

Dated: 2011-09-04 | Length: 672 | CRC: -1871696585

                
ID   FJ001819; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   FJ001819;
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DT   04-SEP-2011 (Rel. 110, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CTV-D1 nonfunctional coat protein gene,
DE   complete sequence.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Biswas K.K., Dwivedi S., Tarafdar A.;
RT   "Molecular characterization of citrus tristeza virus from India";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Dwivedi S., Biswas K.K., Tarafdar A.;
RT   ;
RL   Submitted (06-AUG-2008) to the INSDC.
RL   Plant Pathology, Indian Agricultural Research Institute, New Delhi, Delhi,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus aurantifolia"
FT                   /isolate="CTV-D1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Delhi"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12162"
FT   misc_feature    1. .672
FT                   /note="nonfunctional coat protein due to mutation"
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SQ   Sequence 672 BP; 197 A; 125 C; 170 G; 180 T; 0 other;

fj001819 Length: 672  04-SEP-2011  Type: N  Check: 4569  ..

       1  atggacgacg aaacaaagaa attgaaaaac aaaaacaagg agacgaaaga
      51  aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtaaacttac
     101  gcatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc
     151  caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa
     201  gtatcctaac ttacctgaca aagataaaga ctttcacata gctatgatgt
     251  tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc
     301  acgggtatga cgtacactcg ggaagtgttg aagtggaact gtctgacaaa
     351  ctttggacag acgtcgtgtt taactctaag ggtattggta accgtactaa
     401  cgcccttcga gtctggggta gatctaacga tgccctttat ttggcttttt
     451  gtagacagaa ccgcaacttg agttatggtg gacgtccgtt agatgcagga
     501  attccagccg ggtatcacta cctgtgtgcg gatttcttga ccggagctgg
     551  cttgactgat tagaatgtgc agtgtacata caagctaaag agcattgttg
     601  aaaaacgagg ggctgatgag tcgtattact attgtcaggc agcggcagct
     651  tgggaaattt aacacacgtt ga