Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CTV-D2 nonfunctional coat protein gene, complete sequence.

ACC No: FJ001820

Dated: 2011-09-04 | Length: 672 | CRC: -1195609556

                
ID   FJ001820; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   FJ001820;
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DT   04-SEP-2011 (Rel. 110, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CTV-D2 nonfunctional coat protein gene,
DE   complete sequence.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Biswas K.K., Dwivedi S., Tarafdar A.;
RT   "Molecular characterization of citrus tristeza virus from India";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Dwivedi S., Biswas K.K., Tarafdar A.;
RT   ;
RL   Submitted (06-AUG-2008) to the INSDC.
RL   Plant Pathology, Indian Agricultural Research Institute, New Delhi, Delhi,
RL   India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus aurantifolia"
FT                   /isolate="CTV-D2"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Delhi"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12162"
FT   misc_feature    1. .672
FT                   /note="nonfunctional coat protein due to mutation"
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SQ   Sequence 672 BP; 189 A; 122 C; 180 G; 181 T; 0 other;

fj001820 Length: 672  04-SEP-2011  Type: N  Check: 4117  ..

       1  atggacgacg aaacaaagaa gttgaagaac aaaaacaagg agacgaaaga
      51  aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaacttac
     101  acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggaacc
     151  caacagaacg ccgctttgaa cagagatttg tttcttgctc tgaaagggaa
     201  gtatcctagc ttgtctgaca aggataagga cttccacata gctatgatgt
     251  tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc
     301  acgggcataa catatactcg ggagggtgtt gaagtggatt tgcctgacaa
     351  gctttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc
     451  tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg
     501  gattccggct ggatatcatt acctatgtgc agatttcttg accggagctg
     551  gcttgactga ttggaatgtg ctgtgtacat acaagctaag gaacaattgt
     601  tgaagaaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct
     651  tgggaaattt aacacacgtt ga