Sequence of DPV Wheat streak mosaic virus

Wheat streak mosaic virus isolate Arg1 polyprotein gene, partial cds.

ACC No: FJ348356

Dated: 2009-02-23 | Length: 1267 | CRC: 1896129326

                
ID   FJ348356; SV 1; linear; genomic RNA; STD; VRL; 1267 BP.
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AC   FJ348356;
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DT   23-FEB-2009 (Rel. 99, Created)
DT   23-FEB-2009 (Rel. 99, Last updated, Version 1)
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DE   Wheat streak mosaic virus isolate Arg1 polyprotein gene, partial cds.
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KW   .
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OS   Wheat streak mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Tritimovirus.
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RN   [1]
RP   1-1267
RX   PUBMED; 19132286.
RA   Stenger D.C., French R.;
RT   "Wheat streak mosaic virus genotypes introduced to Argentina are closely
RT   related to isolates from the American Pacific Northwest and Australia";
RL   Arch. Virol. 154(2):331-336(2009).
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RN   [2]
RP   1-1267
RA   Stenger D.C., French R.;
RT   ;
RL   Submitted (02-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1267
FT                   /organism="Wheat streak mosaic virus"
FT                   /host="Triticum aestivum"
FT                   /isolate="Arg1"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:31741"
FT   CDS             <1. .1134
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains nuclear inclusion b (NIb) and coat protein"
FT                   /protein_id="ACN22055.1"
FT                   /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESGEAATDAVLAAANAGT
FT                   GSAPSSGSTQSSLSASTASGSGSSPSGSGSGAAGGSGSGSAQTQSNNVSVMAGLDTGGA
FT                   KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLAFPAPKITTKAIYMPKTVRDKIK
FT                   PEMINNMIKYQPRAELIDNRYATTEQLNTWIKEASEGLDVTEDVFINTLLPGWVYHCII
FT                   NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE
FT                   SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK
FT                   LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA"
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SQ   Sequence 1267 BP; 387 A; 266 C; 344 G; 270 T; 0 other;

fj348356 Length: 1267  23-FEB-2009  Type: N  Check: 4487  ..

       1  gttgaggatt tgtacttgac tgggactcga acggatttag gagaagagat
      51  taaggaatgt ggagagcaat actgcgtgta cgaatcgggt gaggccgcaa
     101  ctgacgctgt cttggcagca gcaaatgcag gaactggtag tgcaccgagt
     151  agtggaagta ctcaatcaag tctgagcgca agtactgcta gcggatcagg
     201  gagctcacca tcagggtcag gttctggagc agcgggtgga tcaggttctg
     251  gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctggac
     301  acgggaggag ctaagacagg tcaaggatca ggatcaaaag ggacgggtgg
     351  ttcattcaca tcgaatcccg tgcgaactgg aggccgagca acggatgtgc
     401  aagatcagac accaggttta gcatttccag caccaaagat cacaacaaag
     451  gccatataca tgccaaaaac cgtacgcgac aagataaagc ctgaaatgat
     501  aaataacatg atcaaatacc aaccgcgtgc ggaacttatc gacaacagat
     551  atgcaacaac tgaacaactc aacacctgga taaaagaggc atctgaaggg
     601  cttgacgtga cagaggatgt tttcataaac accttacttc caggatgggt
     651  ctaccactgc ataatcaaca caacgagccc agagaacaga gcactaggaa
     701  cttggcgtgt tgtgaataat gcaggcaagg acaatgagca gcaactcgag
     751  tttaaaattg aaccaatgta caaagctgcg aagccatcac ttcgagccat
     801  tatgcgtcac tttggcgaag gagctcgagt gatgatcgag gagagtgttc
     851  ggattggaaa acctatcata ccaaggggct tcgacaaggc tggtgtgcta
     901  agcatcaaca atattgtggc agcgtgtgat ttcatcatgc gcggtgcaga
     951  tgacacacca aattttgtgc aagtgcagaa cagcgttgca gtgaacaggc
    1001  tacgcggaat acaaaacaag ttgtttgcac aggcacgact gagtgcgggt
    1051  actaatgagg ataactcacg tcatgatgca gatgatgtga gggagaacac
    1101  gcacagtttc aatggtgtaa acgctcttgc gtgagcacag tagaaactac
    1151  aaatccacga gtaccaggat ttgagcggaa taacgctgcg tttcgttaac
    1201  ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tgcattcttg
    1251  gtagctatgt gtgggtt