Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate Keaowhan Mandarin 50 coat protein (p25) gene, partial cds.

ACC No: FJ440565

Dated: 2008-12-16 | Length: 666 | CRC: 1729647058

                
ID   FJ440565; SV 1; linear; genomic RNA; STD; VRL; 666 BP.
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AC   FJ440565;
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DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
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DE   Citrus tristeza virus isolate Keaowhan Mandarin 50 coat protein (p25) gene,
DE   partial cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-666
RA   Paradornuwat A., Kositratana W., Chowpongpang S.;
RT   "Cloning and Sequencing of Citrus Tristeza Closterovirus Coat Protein
RT   Gene";
RL   Thai J. Agric. Sci. 37:99-108(2004).
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RN   [2]
RP   1-666
RA   Paradornuwat A., Kositratana W., Chowpongpang S.;
RT   ;
RL   Submitted (08-OCT-2008) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Kasetsart University, Phahonyotin, Jatujak, Bangkok 10900,
RL   Thailand
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FH   Key             Location/Qualifiers
FH
FT   source          1. .666
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="Keaowhan Mandarin 50"
FT                   /serotype="Rangsit"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /PCR_primers="fwd_name: CTV-Bam, fwd_seq:
FT                   ggattcgacgaaacaaagaaattgaag, rev_name: CTV-Hind, rev_seq:
FT                   aagctttcaacgtgtgttgaatttc"
FT                   /db_xref="taxon:12162"
FT   gene            <1. .666
FT                   /gene="p25"
FT   CDS             <1. .666
FT                   /codon_start=1
FT                   /gene="p25"
FT                   /product="coat protein"
FT                   /protein_id="ACJ23472.1"
FT                   /translation="DETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDVRQ
FT                   LGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGITYT
FT                   REGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRPLD
FT                   AGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEAVVTNVRQLGKFNTR"
XX
SQ   Sequence 666 BP; 195 A; 125 C; 166 G; 180 T; 0 other;

fj440565 Length: 666  16-DEC-2008  Type: N  Check: 6050  ..

       1  gacgaaacaa agaaattgaa gaacaaaaac aaggaaacaa aagaaggcga
      51  cgatgttgtt gctgccgagt cttctttcgg ttccgtaaac ttacacatcg
     101  atccgacttt gataacgatg aacgatgtgc gtcagttagg cacccaacag
     151  aacgctgctt tgaacagaga cttgttcctt actttgaaag ggaagtatcc
     201  taacttacct gataaagata aggactttca catagctatg atgttgtatc
     251  gtttagcagt taagagttca tcattacaaa gtgatgacga cgccacgggt
     301  ataacataca ctcgggaggg tgttgaagtg gatttgtctg ataaactttg
     351  gactgacgtc gtgttcaact ctaagggtat tggtaaccgt actaacgccc
     401  ttcgagtttg gggtagaact aacgatgccc tttacttagc tttttgcaga
     451  cagaatcgca atttgagtta tggcggacgt ccgctagacg cagggattcc
     501  ggccgggtat cattacttgt gtgcggattt cttgactgga gctggtttga
     551  ctgacttaga atgtgctgtg tacatacaag ctaaagaaca attattgaag
     601  aagcgagggg ctgatgaagc cgtagttact aatgtcaggc agcttgggaa
     651  attcaacaca cgttga