Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Shokun Mandarin 139 coat protein (p25) gene, partial cds.
ACC No: FJ440566
Dated: 2008-12-16 | Length: 666 | CRC: 2073000707
ID FJ440566; SV 1; linear; genomic RNA; STD; VRL; 666 BP. XX AC FJ440566; XX DT 16-DEC-2008 (Rel. 98, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE Citrus tristeza virus isolate Shokun Mandarin 139 coat protein (p25) gene, DE partial cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-666 RA Paradornuwat A., Kositratana W., Chowpongpang S.; RT "Cloning and Sequencing of Citrus Tristeza Closterovirus Coat Protein RT Gene"; RL Thai J. Agric. Sci. 37:99-108(2004). XX RN [2] RP 1-666 RA Paradornuwat A., Kositratana W., Chowpongpang S.; RT ; RL Submitted (08-OCT-2008) to the EMBL/GenBank/DDBJ databases. RL Plant Pathology, Kasetsart University, Phahonyotin, Jatujak, Bangkok 10900, RL Thailand XX FH Key Location/Qualifiers FH FT source 1. .666 FT /organism="Citrus tristeza virus" FT /isolate="Shokun Mandarin 139" FT /serotype="Rangsit" FT /mol_type="genomic RNA" FT /country="Thailand" FT /PCR_primers="fwd_name: CTV-Bam, fwd_seq: FT ggattcgacgaaacaaagaaattgaag, rev_name: CTV-Hind, rev_seq: FT aagctttcaacgtgtgttgaatttc" FT /db_xref="taxon:12162" FT gene <1. .666 FT /gene="p25" FT CDS <1. .666 FT /codon_start=1 FT /gene="p25" FT /product="coat protein" FT /protein_id="ACJ23473.1" FT /translation="DETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDVRQ FT LGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGMTYT FT REGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRPLD FT AGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGAGEVIVTNVRQLGKFNTR" XX SQ Sequence 666 BP; 198 A; 126 C; 164 G; 178 T; 0 other; fj440566 Length: 666 16-DEC-2008 Type: N Check: 3677 .. 1 gacgaaacaa agaaattgaa gaacaaaaac aaggaaacga aagaaggcga 51 cgatgttgtt gcagctgagt cttctttcgg ttccgtaaac ttacacatcg 101 atccgactct gataacgatg aacgatgtgc gtcagttggg tacccaacag 151 aacgctgctt tgaatagaga tttgtttctt accttgaaag ggaagtatcc 201 taacttacct gacaaagata aagactttca catagctatg atgttatatc 251 gtttagctgt taagagttca tcattacaaa gcgacgatga taccacgggt 301 atgacgtaca ctcgggaagg tgttgaagtg gaattgtctg acaaactttg 351 gacagacgtc gtgtttaact ctaagggtat tggtaaccgt actaacgccc 401 ttcgagtctg gggtagatct aacgatgccc tttatttggc tttttgtaga 451 cagaaccgca acttgagtta tggtggacgt ccgttagacg caggaattcc 501 agccgggtat cactacctgt gtgcagattt cttgaccgga gccggcttga 551 ctgatttaga atgtgctgtg tacatacaag ctaaagagca attattaaag 601 aagcgagggg ctggtgaagt catagttacc aatgtcaggc agcttgggaa 651 attcaacaca cgttga