Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone Z8 nonfunctional coat protein gene, complete sequence.

ACC No: FJ622883

Dated: 2009-03-08 | Length: 672 | CRC: -1512804325

                
ID   FJ622883; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   FJ622883;
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DT   08-MAR-2009 (Rel. 100, Created)
DT   08-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Citrus tristeza virus clone Z8 nonfunctional coat protein gene, complete
DE   sequence.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Liu Y., Zhou C., Atta S., Zou Q., Cao M.;
RT   "Preliminary characterization of CTV isolates from Zhejiang, China";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Liu Y., Zhou C., Atta S., Zou Q., Cao M.;
RT   ;
RL   Submitted (12-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   National Citrus Virus Exclusion Center, Citrus Research Institute of
RL   Chinese Academy of Agriculture, 15 Citrus Village, Beibei, Chongqing
RL   400712, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="grapefruit"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /collection_date="12-Oct-2008"
FT                   /clone="Z8"
FT                   /note="PCR_primers=fwd_name: CTV-CP1, rev_name: CTV-CP3"
FT                   /db_xref="taxon:12162"
FT   misc_feature    1. .672
FT                   /note="nonfunctional coat protein due to mutation"
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SQ   Sequence 672 BP; 192 A; 121 C; 170 G; 189 T; 0 other;

fj622883 Length: 672  08-MAR-2009  Type: N  Check: 5144  ..

       1  atggacgacg aaacaaagaa attgaagaat atagataagg aaacgaaaga
      51  aggcgacaat gttgttgctg ctgagtcttc tttcggttcc ttaaacttac
     101  acatcgatcc gactttgata tcaatgaatg atgtgcgtca gttgggtacc
     151  caacagaacg ctgctttgaa cagggactta tttcttactt tgaaagggaa
     201  gtatcctaac ttacctgaca aagataagga ttttcaccta gctatgatgt
     251  tgtatcgttt ggcagtttag agttcatcat tacaaagcga tgacgacacc
     301  acgggtataa cgtatactcg ggagggtgtt gaagtggaat tgtctgacaa
     351  actttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  acgcccttcg agtttggggt agaacaaacg atgcccttta cttagctttt
     451  tgtagacaaa atcgcgattt gagttatggc ggacgtccgc tagatgcagg
     501  gattccggcc gggtatcatt acctgtgtgc ggatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga