Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone Z24 coat protein gene, complete cds.

ACC No: FJ622885

Dated: 2009-03-08 | Length: 672 | CRC: -855134725

                
ID   FJ622885; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   FJ622885;
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DT   08-MAR-2009 (Rel. 100, Created)
DT   08-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Citrus tristeza virus clone Z24 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Liu Y., Zhou C., Atta S., Zou Q., Cao M.;
RT   "Preliminary characterization of CTV isolates from Zhejiang, China";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Liu Y., Zhou C., Atta S., Zou Q., Cao M.;
RT   ;
RL   Submitted (12-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   National Citrus Virus Exclusion Center, Citrus Research Institute of
RL   Chinese Academy of Agriculture, 15 Citrus Village, Beibei, Chongqing
RL   400712, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="grapefruit"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /collection_date="12-Oct-2008"
FT                   /clone="Z24"
FT                   /note="PCR_primers=fwd_name: CTV-CP1, rev_name: CTV-CP3"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACN43310.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVAAVESSFGSLDLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVELSDKFWTDVVFNSKGIGNRTNALRAWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 193 A; 129 C; 172 G; 178 T; 0 other;

fj622885 Length: 672  08-MAR-2009  Type: N  Check: 8227  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaaag aaacgaagga
      51  aggcgacgat gttgctgctg tcgagtcttc tttcggttct ttagacttac
     101  acatcgatcc gacactgata gcgatgaatg atgtgcgtca gttgggtacc
     151  caacagaacg ctgctttgaa cagagattta tttcttactt tgaaagggaa
     201  gtatcctaac ctacctgaca aagacaagga ctttcactta gctatgatgt
     251  tgtatcgttt agcggtcaag agttcatcat tacaaagcga tgacgacacc
     301  acgggtataa cgtatactcg ggagggtgtt gaagtggaat tgtctgacaa
     351  attttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  acgcccttcg agcttggggt agaactaacg atgcccttta cttagctttc
     451  tgcagacaga atcgcaattt gagttatggc gggcgtccgc tagacgcagg
     501  gattccggcc gggtatcatt acctgtgcgc agatttcttg actggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga