Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate Y25 coat protein gene, complete cds.

ACC No: FJ667599

Dated: 2009-02-24 | Length: 672 | CRC: -790831234

                
ID   FJ667599; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   FJ667599;
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DT   24-FEB-2009 (Rel. 99, Created)
DT   24-FEB-2009 (Rel. 99, Last updated, Version 1)
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DE   Citrus tristeza virus isolate Y25 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Liu Y., Zhou C., Cao M., Zou Q., Atta S., Yu Z.;
RT   "Preliminary characterization of CTV isolate from Enshi, Hubei";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Liu Y., Zhou C., Cao M., Zou Q., Atta S., Yu Z.;
RT   ;
RL   Submitted (17-JAN-2009) to the EMBL/GenBank/DDBJ databases.
RL   National Citrus Virus Exclusion Center, Citrus Research Institute of
RL   Chinese Academy of Agriculture, No.15 Citrus Village, Beibei, Chongqing
RL   400712, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="Y25"
FT                   /mol_type="genomic RNA"
FT                   /note="PCR_primers=fwd_name: CTV-CP1, rev_name: CTV-CP3"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ACN22834.1"
FT                   /translation="MDDETKKLKNKNKEAKEGDDVVAAESSFGSMNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLALKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVDVDLPDKFWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 196 A; 130 C; 168 G; 178 T; 0 other;

fj667599 Length: 672  24-FEB-2009  Type: N  Check: 312  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga
      51  aggcgacgac gttgttgctg ctgagtcttc tttcggttcc atgaacttac
     101  acatcgatcc aactctgata acgatgaatg acgtgcgtca gttgggtacc
     151  caacagaacg ctgctttaaa cagagactta tttcttgctt tgaaagggaa
     201  gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt
     251  tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact
     301  acaggtataa cgtacactcg ggagggtgtt gacgtggatt tgcctgacaa
     351  attttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta
     401  acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt
     451  tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg
     501  gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga