Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate 12-4 p23 gene, complete cds.
ACC No: FJ860136
Dated: 2009-04-26 | Length: 633 | CRC: 509280036
ID FJ860136; SV 1; linear; genomic RNA; STD; VRL; 633 BP. XX AC FJ860136; XX DT 26-APR-2009 (Rel. 100, Created) DT 26-APR-2009 (Rel. 100, Last updated, Version 1) XX DE Citrus tristeza virus isolate 12-4 p23 gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-633 RA Scott K.A., Pietersen G.; RT "Characterization of the p23 gene of South African Citrus tristeza virus RT isolates"; RL Unpublished. XX RN [2] RP 1-633 RA Scott K.A., Pietersen G.; RT ; RL Submitted (25-MAR-2009) to the EMBL/GenBank/DDBJ databases. RL Microbiology, University of Pretoria, Lunnon Rd, Pretoria, Gauteng 0002, RL South Africa XX FH Key Location/Qualifiers FH FT source 1. .633 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia" FT /isolate="12-4" FT /mol_type="genomic RNA" FT /country="South Africa" FT /collection_date="02-Oct-2008" FT /db_xref="taxon:12162" FT CDS 1. .630 FT /codon_start=1 FT /product="p23" FT /protein_id="ACP19713.1" FT /translation="MDDTSGQTFISVNLSDESNTASTEVKTVSLEADRLEFLRKMNPFI FT IDALIRKTNYQGARFRARIIGVCVDCGRKHDKASRTERKCKVNNTQSQAEVAHMLMHDP FT VKYLNKRKARAFSNAEMFAIDLVMHTKERQLAVDLAAEREKTRLARRHPMRSPEETPEH FT YKFGITAKAMLPDIDAIDVGDNEDTSSEYPVSLSVSGGVLREHHFI" XX SQ Sequence 633 BP; 192 A; 123 C; 160 G; 158 T; 0 other; fj860136 Length: 633 26-APR-2009 Type: N Check: 1298 .. 1 atggacgata ctagcggaca aacttttatt tctgtgaacc tttctgacga 51 aagcaacaca gctagcactg aagtcaaaac cgtaagtttg gaagcggatc 101 gcttggaatt tttacggaaa atgaatccct ttattatcga cgccttgata 151 cggaaaacca attatcaggg tgctcgcttt cgcgcgagaa taataggagt 201 gtgcgtggat tgtggtagaa aacacgataa ggcatcgagg actgaacgta 251 agtgtaaagt caacaataca caatctcagg ccgaggtggc gcatatgtta 301 atgcacgatc ccgtgaaata tttaaataaa agaaaagcta gagctttttc 351 taacgcagag atgtttgcga tcgatttggt tatgcatacc aaagaaaggc 401 aattagcggt tgatttggcc gctgaaaggg agaagacgag attggctcgt 451 agacacccga tgcgttctcc ggaggaaact ccggaacatt ataagttcgg 501 tataactgct aaggcaatgt taccggacat cgacgctata gacgttggtg 551 ataacgagga cacttcgtcg gaatacccag tgagtctgag tgtttcaggc 601 ggagttctcc gtgaacacca cttcatctga ttg