Sequence of DPV Maize streak virus
Maize streak virus isolate MSV-A_ZW_Maz3_g265-2008, complete genome.
ACC No: FJ882148
Dated: 2009-12-06 | Length: 2690 | CRC: 319121919
ID FJ882148; SV 1; circular; genomic DNA; STD; VRL; 2690 BP. XX AC FJ882148; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A_ZW_Maz3_g265-2008, complete genome. XX KW . XX OS Maize streak virus OC Viruses; ssDNA viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2690 RX PUBMED; 19692547. RA Harkins G.W., Martin D.P., Duffy S., Monjane A.L., Shepherd D.N., RA Windram O.P., Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., RA Flett B., Ramusi M., Rybicki E.P., Peterschmitt M., Varsani A.; RT "Dating the origins of the maize-adapted strain of maize streak virus, RT MSV-A"; RL J. Gen. Virol. 90(PT 12):3066-3074(2009). XX RN [2] RP 1-2690 RA Harkins G.W., Martin D.P., Monjane A.L., Shepherd D.N., Windram O.P., RA Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., Flett B., Ramusi M., RA Rybicki E.P., Peterschmitt M., Varsani A.; RT ; RL Submitted (02-APR-2009) to the EMBL/GenBank/DDBJ databases. RL Electron Microscope Unit, University of Cape Town, Private Bag, Cape Town, RL WP 7701, South Africa XX FH Key Location/Qualifiers FH FT source 1. .2690 FT /organism="Maize streak virus" FT /host="maize" FT /isolate="MSV-A_ZW_Maz3_g265-2008" FT /mol_type="genomic DNA" FT /country="Zimbabwe" FT /lat_lon="17.7 S 30.93 E" FT /collection_date="2008" FT /db_xref="taxon:10821" FT CDS 157. .462 FT /codon_start=1 FT /product="movement protein" FT /protein_id="ACZ04307.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473. .1207 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ACZ04308.1" FT /translation="MSTSKRKRGDDSNWNKRVPKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAVDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNTSWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1717. .2535) FT /codon_start=1 FT /product="RepA" FT /protein_id="ACZ04309.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLNALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKEEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPDIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2690 BP; 692 A; 627 C; 688 G; 683 T; 0 other; fj882148 Length: 2690 06-DEC-2009 Type: N Check: 7103 .. 1 taatattacc gcgccttctt ttcctgcgag ggcccggtag ggaccgagcg 51 ctttgattta aagcttggtc ctgctttgta tgatttatct aaagcagccc 101 aatctaaaga aaccggtccc gggcactata aattgcctaa caagtgcgat 151 tcattcatgg atccacagaa cgccctgtat tatcagccgc gggtacccac 201 agcagctccg acatccggag gagtgccgtg gagtcgcgta ggcgaggtag 251 ctattttgag ctttgttgca ttgatttgct tttacctgct ttacctttgg 301 gtgctgagag atcttatctt agttctgaag gctcgacaag gcagatccac 351 ggaggagctg atatttggtg gacaagctgt ggataggagc aaccctatcc 401 ctaatctacc agcaccacca agtcagggca atcccgggcc atttgttcca 451 ggcacgggat aagcaatcag ccatgtccac gtccaagagg aagcggggag 501 atgattcgaa ttggaataag cgggtgccta agaagaagcc atcttcagct 551 gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 601 gacactccag catgcgggga ccaccatgat aacggtcccc tctggaggag 651 tatgtgacct catcaacacc tatgcccgag gatctgacga gggcaaccgc 701 cacaccagcg agactctgac gtacaagatc gccgtcgact accacttcgt 751 tgccgacgcg gctgcctgcc gctactccaa caccggaacc ggtgtaatgt 801 ggctggtgta tgacaccact cccggcggac aagctccgac cccgcaaact 851 atatttgcct accctgacac gctaaaagcg tggccggcca catggaaagt 901 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca 951 acatggagac cgacggtcgg attggttcgg atatccctcc ctcgaataca 1001 agttggaagc cttgcaagcg caacatctac ttccacaagt tcacgagtgg 1051 gttgggagtg agaacgcagt ggaagaatgt aacggacgga ggagttggtg 1101 ccatccagag aggagcgctg tacatggtta ttgcccccgg caatggcctt 1151 acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1201 ccagtaatga ataaaaacgc ccgttttatt atatctgatg aatgctgaaa 1251 gcttacatta atatgtcgtg cgatggcacg aaaaaacaca cgcaatcaat 1301 acaggggggt agtcggcggg cggctaaggg tggtgctcgg cgggcaaaac 1351 atcgaaaaat caagatctat atgaattaca cttcctccgt aggaggaagc 1401 acagggggag aataccattt ctcccccggc gacataatgt aaatgatgca 1451 gtttgcctcg aaatactcca gctgccctgg agtcatttcc ttcatccaat 1501 cttcatccga gttggcgagg attattgtag gcttagactt cttctgcacc 1551 tttttcttct taccatactt ggggtttaca atgaaatccc tctgacagcc 1601 aactaactgt ttccaacaag gacagaattt aaatggaata tcatctacga 1651 tgttgtagat tgcgtcttcg ttgtatgaag accaatcaac attattttgc 1701 cagtaattat gaatccctag gcttctggcc caagtagatt ttccggttct 1751 tgttgggccg acgatgtaga ggctctgctt tcttgatctt tcatctgatg 1801 actggataca gaatccatcc attgcaggtc agaaattgca tcctcgaggg 1851 tataacaggt aggttgaagt agcatgtaag cttcgggact aacctggaag 1901 atgttaggct ggagccaatc gttgattgac tcattacaaa gtaaatcagg 1951 tgaggagggt ggatgaggat tggtgaactc ttcctgaatg tcaggaaaaa 2001 gcttatttgc agagtattca aaatactgca attttgtgga ccaatcaaag 2051 gggagctctt tctggatcat tgagaggtac tcttctttgg aggtagcgtg 2101 tgaaataatg tctcgcatta tttcatcttt agaaggcttt ttttccttta 2151 cctctgaatc agattttcct aggaaggggg acttcctagg aatgaaagta 2201 cctctctcaa acacagccag aggttccttg agaatgtaat ccctcactct 2251 gttaactgac ttggcactct gaatatttgg gtgaaaccca ttaatatcaa 2301 agaaccttga gtcagatatc cttaccggct tctctgtctg aagtaatgca 2351 tttaaatgca aacttccatc tttatgtgcc tctcgggcac atagaatata 2401 tttgggaatc caacgaacga cgagctccca gatcatctga caggcgattt 2451 caggattttc tggacacttt ggataggtta ggaacgtgtt tgcgttcctg 2501 tgtgagaact gacggttgga tgaggaggag gccatagccg acgacggagg 2551 ttgaggctga gggatggcag actgggagct ccaaactcta tagtatacct 2601 gtgcgccttc gaaatccgcc gctcccttgt tttatagtgg ttgtaaatgg 2651 gccggaccgg gccggcccag caggaaaaga aggcgcgcac