Sequence of DPV Hosta virus X
Hosta virus X isolate TnSm1 coat protein (CP) gene, complete cds.
ACC No: FJ903415
Dated: 2009-11-18 | Length: 663 | CRC: 1610313961
ID FJ903415; SV 1; linear; genomic RNA; STD; VRL; 663 BP. XX AC FJ903415; XX DT 18-NOV-2009 (Rel. 102, Created) DT 18-NOV-2009 (Rel. 102, Last updated, Version 1) XX DE Hosta virus X isolate TnSm1 coat protein (CP) gene, complete cds. XX KW . XX OS Hosta virus X OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; OC Alphaflexiviridae; Potexvirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-663 RX PUBMED; 19838620. RA Fajolu O.L., Wen R.H., Windham A.S., Windham M.T., Moulton J.K., RA Hajimorad M.R.; RT "Genetic variability and phylogenetic analysis of hosta virus X"; RL Arch. Virol. 0:0-0(2009). XX RN [2] RP 1-663 RA Fajolu O.L., Wen R.H., Hajimorad M.R.; RT ; RL Submitted (08-APR-2009) to the EMBL/GenBank/DDBJ databases. RL Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson RL Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996, USA XX FH Key Location/Qualifiers FH FT source 1. .663 FT /organism="Hosta virus X" FT /host="Hosta sp." FT /isolate="TnSm1" FT /mol_type="genomic RNA" FT /country="USA:Tennessee" FT /note="collected between August 2007 and March 2008" FT /db_xref="taxon:214439" FT gene 1. .663 FT /gene="CP" FT CDS 1. .663 FT /codon_start=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="ACY71464.1" FT /translation="MASDAPTPPAAPSPVTFTAPTQEQLTSLALPIISTRLPSPDVLNQ FT ISVKWQELGVPTASISSTAIALCMACYHSGSSGSTLIPGLAPGTTVNYTSLAAAVKSLA FT TLREFARYFAPIIWNYAIEHKIPPANWAAMGYKENTKYAAFDTFDSILNPAALQPTGGL FT IRQPTEEELLAHQANSALHIFDSLRNDFASTDGRVTRGHITSNVNSLNYLPAPEGSS" XX SQ Sequence 663 BP; 167 A; 235 C; 150 G; 111 T; 0 other; fj903415 Length: 663 18-NOV-2009 Type: N Check: 5283 .. 1 atggcaagtg acgcaccaac tccaccagct gccccatctc ccgtgacctt 51 cactgcacca acacaggaac aactgacgtc cctggccctg cccatcatta 101 gcacaaggct cccaagcccc gatgtgctca accagatctc agtgaagtgg 151 caggaactgg gggttcctac ggccagcatt tcgtccacag ccatagcgct 201 gtgtatggcc tgctaccact cagggtcctc agggagcacc ctcatcccag 251 gactcgcgcc aggcacaacg gtcaactaca cctccctcgc ggcagcagtg 301 aagtccctag ccacactcag ggagttcgca aggtacttcg cccccatcat 351 ctggaattat gcgatcgagc acaagattcc accagccaac tgggcggcga 401 tgggctacaa agaaaacacg aagtacgcgg ctttcgacac cttcgactcc 451 atcctcaatc ccgcggcgct gcaacccacg ggaggcctaa tcagacaacc 501 aacagaggag gagctcctgg cccaccaagc aaactcagcc ctccacatct 551 tcgattccct gagaaacgac ttcgcctcca ctgacggcag ggtgacaaga 601 ggacacatca cctccaacgt gaactcactc aactaccttc ctgccccgga 651 aggctcaagt tga