Sequence of DPV Beet soil-borne virus
Beet soil-borne virus isolate PL segment RNA 3, complete sequence.
ACC No: FJ971719
Dated: 2009-06-18 | Length: 3005 | CRC: 1213192596
ID FJ971719; SV 1; linear; genomic RNA; STD; VRL; 3005 BP.
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AC FJ971719;
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DT 18-JUN-2009 (Rel. 101, Created)
DT 18-JUN-2009 (Rel. 101, Last updated, Version 1)
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DE Beet soil-borne virus isolate PL segment RNA 3, complete sequence.
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KW .
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OS Beet soil-borne virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
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RN [1]
RP 1-3005
RA Borodynko N., Rymelska N., Hasiow-Jaroszewska B., Pospieszny H.;
RT "Full length genome sequence of Polish Beet soil-borne virus confirm low
RT level of genetic diversity in virus population";
RL Unpublished.
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RN [2]
RP 1-3005
RA Borodynko N., Rymelska N., Hasiow-Jaroszewska B., Pospieszny H.;
RT ;
RL Submitted (28-APR-2009) to the EMBL/GenBank/DDBJ databases.
RL Virology and Bacteriology, Institute of Plant Protection, National Research
RL Institute, Wegorka 20, Poznan 60-318, Poland
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CC GenBank Accession Numbers FJ971717-FJ971719 represent the complete
CC genome of Beet soil-borne virus.
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FH Key Location/Qualifiers
FH
FT source 1. .3005
FT /organism="Beet soil-borne virus"
FT /segment="RNA 3"
FT /host="sugar beet"
FT /isolate="PL"
FT /mol_type="genomic RNA"
FT /country="Poland"
FT /db_xref="taxon:46436"
FT CDS 405. .1688
FT /codon_start=1
FT /product="48K protein"
FT /note="BSBVs3gp1; triple gene block protein; presumably
FT cell to cell movement"
FT /protein_id="ACS14042.1"
FT /translation="MEKEKLQKKEKNLKRRTNKKGVRRLDKKNSEGKTKEDSRKSVEED
FT VADDLGAHESVAKDRAATCERGKSQRQRVNQETSVKEGAGVDSKLGSDRYAGKRQLEVV
FT SRICQESGFVATGKPLKRYPEDYFLKSGLLSDFDKYLSDRLDKGCNLTKSETETVLKHL
FT RQKRRPQSFLAGSVTGVPGSGKTTLLRKIQTEAGLNSVVILANERHKIRFTQLPACYTA
FT KEILLLRTAIKYDVLLIDEYTLLQNGEILLLQRILEAKVVVLFGDRAQGNSRTADSPEW
FT LQIPVIYSSVKSRRFGKATADFCGKQGFDFEGCDQEDEVQKLDFEGSSPETDINLALTE
FT ATIEDLKEVGIECSLVKDVQGNEYDSVSLFIREEDRAALSDPELRSVAFTRHRKLLIVR
FT IPVCLMLSLFNGELNSDYRPQTNHYGKN"
FT CDS 1675. .2025
FT /codon_start=1
FT /product="13K protein"
FT /note="BSBVs3gp2; triple gene block protein"
FT /protein_id="ACS14043.1"
FT /translation="MVRTNEIGARPNKYWPIVVGVFAIALFSFLTITNQKHATESGDNI
FT HKFANGGKFQDGNKRVHYNKNNHRAYNGSSSNNTFSKLLLPGLFLAAIMYAYVQYRKPQ
FT CTVTCRGECAHG"
FT CDS 1889. .2461
FT /codon_start=1
FT /product="22K protein"
FT /note="BSBVs3gp3; triple gene block protein"
FT /protein_id="ACS14044.1"
FT /translation="MDPPAIIHSQNCCCPDCSWQPSCTHTSNTESLNARSPVEENARMV
FT KGYSTDYVIMCVIVSVSLGFAIAAYFYSSGGHYDPDAAIFKQDLNEVQINFGKHPIDPK
FT VIEAVHHWQRAPFGRFQGESVDVSKNFFEDSVDEDDEEERAEVNKEEVAKKKSKVAICN
FT RLCSIRNSLLRLFWTITLIIIMVKCRF"
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SQ Sequence 3005 BP; 919 A; 502 C; 663 G; 921 T; 0 other;
fj971719 Length: 3005 18-JUN-2009 Type: N Check: 9812 ..
1 ggtatttttt tttcttgccg gtcgcttgtg atcaattaga aaaaacttat
51 cataaataat cttgtatggg tacatatcag ccggttttaa ccaattgttt
101 gtaccttgta ctctggatta ttttaataaa aacactatta gacgtgtttc
151 ttcaatttga aatttttgat ttcgaataat ttattcttag gtatcctctt
201 cttcttacaa gtcaccgctt tttggcatcg acttgctaga agttttgaag
251 acctttaaga ttgttttatt cggtttcggg acctcaattt gaagtttttc
301 gtttcgtatc gcaaaagtaa aacccaagct agtaaaaact tttcttatcg
351 ccgtttcttg acacagattc gataagttta tgttattttg agttttactt
401 atttatggaa aaggagaagt tgcaaaagaa ggagaaaaat cttaaacgca
451 ggactaacaa aaagggggtc aggcgcttag ataaaaaaaa ctccgaaggg
501 aaaactaagg aagatagtcg taagtcagta gaagaagacg ttgcggacga
551 tcttggggca cacgaaagtg ttgcgaaaga tcgtgcagct acttgcgaga
601 ggggtaagtc acagcgacaa cgtgttaatc aggagacttc agttaaagaa
651 ggagctggtg tggattccaa actaggttcc gacagatacg caggtaagag
701 acaacttgaa gttgtgtcgc gaatttgtca ggaaagtggt tttgttgcaa
751 ccggaaaacc gttaaaacgc tatccagaag attatttctt gaaatccggc
801 ttattgtccg acttcgataa atacttaagt gataggttgg ataaaggctg
851 taatttaacc aagtcagaaa cggaaacagt tcttaagcac ctgcgacaga
901 aaaggagacc tcagtctttt cttgctggaa gtgttaccgg cgtacctggt
951 agtggaaaaa ccactttgct tagaaaaatt caaaccgaag cgggtttgaa
1001 ctccgttgtt atattggcta acgagcgtca caaaatacgt tttacacagt
1051 tgccggcttg ttatacagct aaagaaatat tgttgttgag aacggcaatt
1101 aagtacgacg ttttgttaat agacgagtat acgttgttgc agaacggcga
1151 aattttgtta ctgcaacgta tactagaagc gaaagtagtg gtgctatttg
1201 gtgacagagc gcaaggcaac tcccgtactg cggacagtcc agagtggttg
1251 cagattccag ttatttactc ttctgttaag agtagacgtt ttggaaaggc
1301 taccgcggat ttttgcggca aacagggttt tgattttgag ggttgtgatc
1351 aggaggacga agtgcagaaa ttagatttcg aagggtcgtc acctgagaca
1401 gacatcaatt tagcgctgac cgaagctact attgaggatc tgaaagaagt
1451 tgggatagag tgttctttgg ttaaagacgt tcaaggcaac gaatacgatt
1501 ccgtgtctct ttttattaga gaagaggatc gcgcggcact atccgatcca
1551 gagttgagaa gtgttgcgtt tacgaggcat agaaagctgc tgatagttcg
1601 tatccccgtt tgtttaatgc tttcactgtt taacggtgag ttgaattcgg
1651 actatcgacc gcaaaccaac cattatggta agaactaatg agatcggcgc
1701 cagacctaat aagtattggc caatagtcgt aggtgtattt gcaattgcgt
1751 tgttcagttt tttaactata actaatcaga aacacgccac agagtcggga
1801 gataatatcc acaagtttgc taacggtgga aaatttcaag acggcaataa
1851 gcgtgttcat tataataaga ataatcatag agcttataat ggatcctcca
1901 gcaataatac attctcaaaa ctgttgttgc ccggattgtt cttggcagcc
1951 atcatgtacg catacgtcca ataccgaaag cctcaatgca cggtcacctg
2001 tagaggagaa tgcgcgcatg gttaaaggtt acagtactga ctatgttatc
2051 atgtgtgtga tagtgagtgt atctttaggt ttcgcaatcg cagcatattt
2101 ttattcatca ggagggcatt acgatcctga cgcggcaatc tttaaacaag
2151 atttaaatga agttcaaatt aacttcggaa agcatccaat tgacccgaaa
2201 gtgattgaag cagtccatca ttggcaacgt gctcctttcg gacgttttca
2251 gggtgaaagc gtggatgtga gtaaaaactt ttttgaagat tccgtagatg
2301 aagatgatga agaggaacgt gccgaggtga ataaagaaga agtagcgaag
2351 aaaaaatcta aagttgctat atgtaatcgc ttgtgttcta ttaggaatag
2401 cttattaagg ttattttgga caatcacctt aataataata atggtaaagt
2451 gtcgtttcta agtctttctt tttaaagttt ttaaactttt ctttctcttt
2501 cgacgactca aaaatttaaa atgattaatc gtactgatca tacgacgcgg
2551 attatgcgaa aataattagt aatgtgcgct aattacttta aaatgtggcg
2601 caactttatg tgaaatatac aaatttttct gtttatttaa cgttaagaag
2651 atatgaaatc tcccataact atgttatggt ttctcgcata tccttttaac
2701 gctaacttta tagaaacgtt tgtatgtttt tgtttaagct ataaacaaag
2751 tagcttgtat cggtgtgcga taataataaa gtttttctca aacttataaa
2801 tgagacgtgg cgaatacgat aattcgtagt gtttgtggat aacactttaa
2851 ttaagattca tattgcggtt cgcagtcatt actaagataa ttataaaaaa
2901 cttagtatct gacctatgcg gatgagacga gttagtctcg accattttca
2951 cacaatggtt ctgaggggtg caactccccc ccttaactag agggaaatct
3001 agccc