Sequence of DPV Eggplant mottled crinkle virus

Eggplant mottled crinkle virus RNA polymerase gene, complete cds.

ACC No: FJ977166

Dated: 2009-06-03 | Length: 1260 | CRC: -689780549

                
ID   FJ977166; SV 1; linear; genomic RNA; STD; VRL; 1260 BP.
XX
AC   FJ977166;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 1)
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DE   Eggplant mottled crinkle virus RNA polymerase gene, complete cds.
XX
KW   .
XX
OS   Eggplant mottled crinkle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Tombusvirus.
XX
RN   [1]
RP   1-1260
RA   Dombrovsky A., Lachman O., Pearlsman M., Antignus Y.;
RT   "Characterization of a new strain of eggplant mottled crinkle virus (EMCV)
RT   infecting eggplants in Israel";
RL   Unpublished.
XX
RN   [2]
RP   1-1260
RA   Dombrovsky A., Lachman O., Pearlsman M., Antignus Y.;
RT   ;
RL   Submitted (30-APR-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, A.R.O. The Volcani Center, P.O. Box 6, Bet-Dagan 50250,
RL   Israel
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1260
FT                   /organism="Eggplant mottled crinkle virus"
FT                   /host="Solanum melongena (eggplant)"
FT                   /mol_type="genomic RNA"
FT                   /country="Israel"
FT                   /db_xref="taxon:270256"
FT   CDS             111. .1001
FT                   /codon_start=1
FT                   /product="RNA polymerase"
FT                   /protein_id="ACR49216.1"
FT                   /translation="MDRLLNFLRPKKEIFVGDFATGVDRRPSVDMFQLVCRLALRYMRT
FT                   GKIEGNVDSLSQFVVELLKTDCAAKWEWFMKRRSVGDYAIPLALATLPIAPLLSYATKV
FT                   NTVSVKAFGNELTFPVRTLRPSLPRKGLLLRLAAGFALAPVCALAVYATLPREKLSVFR
FT                   LRTEARTHMEDEREATDCLVVEPARELKGKGGEDLLTGSRMTKVIASTGRPRRRPYAVK
FT                   VAQVARAKVGYLKNSPENRLIYQRVIIEIMDKDCVRYVDRDVILPLAIGCCFVYPEGVD
FT                   ESAALWGSSESLGVK"
XX
SQ   Sequence 1260 BP; 303 A; 261 C; 369 G; 327 T; 0 other;

fj977166 Length: 1260  03-JUN-2009  Type: N  Check: 1781  ..

       1  gctttgcgta aggaatttct ctcgcacggg tacgatctac ggaccagctg
      51  cgggtttgaa gggtgagcct attcttcgga agggtaaatt gtaactttca
     101  ccaataagca atggatagat tactgaactt tctgagacct aagaaagaaa
     151  ttttcgtggg tgattttgcg accggggttg acaggaggcc atcggtggac
     201  atgttccagt tggtgtgcag gttggctctc agatatatga ggacagggaa
     251  aatcgagggc aatgtggaca gtctttcaca gttcgttgtt gagttgttga
     301  agactgattg tgcagccaaa tgggaatggt ttatgaaacg gcgctctgtc
     351  ggagattatg ccatccctct tgcactggct acactaccca ttgccccgct
     401  gttgagttat gccacaaagg ttaacacggt gagtgtaaag gcgttcggga
     451  atgaattgac tttcccagtc aggacccttc gcccaagctt acctcgtaag
     501  ggcttgctcc ttcggctggc ggccggcttt gcgttagcac ctgtatgcgc
     551  gcttgctgtg tacgctaccc tgccacggga aaaactgtct gtatttaggc
     601  tgagaactga ggcccgcaca cacatggagg atgagaggga agcaacggat
     651  tgtttggtgg ttgagccagc tcgagagctc aaggggaaag gtggggagga
     701  tctcctcact ggtagtagaa tgacaaaggt aattgcgtct acagggcgcc
     751  ctcgcaggag accttatgca gtgaaagttg ctcaggttgc aagagctaag
     801  gtgggttacc ttaagaatag tcctgagaat agattaatct accagagagt
     851  catcattgag atcatggaca aggactgcgt caggtatgtt gacagggatg
     901  tcatattgcc tttggctatt ggatgctgtt ttgtctaccc ggaaggagtg
     951  gatgagtcgg cggcactctg gggctctagt gagtccctgg gtgtgaaata
    1001  gggaggccta gtgcgtctac ctggggttgt gacacagacc aatagagata
    1051  tcccatctgg tgtgttacta ccccaggaag tgctagaggt tcgtacagga
    1101  cctcccaatg ctaaggaccg taatatattt atggttgctg gttgcccatc
    1151  acaggcacgg ttcttagtgc ataatcattg cctgaaaaac cttaagaggg
    1201  gtcttgtgga gagagttttc tgtgttgaga gaaacgggat tctcactcgc
    1251  actccacaac