Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1048

ACC No: FN432884

Dated: 2010-07-27 | Length: 720 | CRC: -1168306311

                
ID   FN432884; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432884;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1048
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1048"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11924.1"
FT                   /translation="MARKGKKINSNQNQQGKKSRRPRGRSVEPRLQRAPVAQASRISGM
FT                   VPGPLSSNVWPVNRSVEFLMDFKRSATSVDATIFNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADTVPSDTGKMSRTAGFVTSSVWYGAEGCHLLTGG
FT                   SARNAVVASMDCSRVDWKRVTSSIPSDVDPNVVNTILPARLAVRSSIKPAVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
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SQ   Sequence 720 BP; 158 A; 193 C; 205 G; 164 T; 0 other;

fn432884 Length: 720  27-JUL-2010  Type: N  Check: 297  ..

       1  atggccagga agggcaagaa aatcaactcc aaccaaaacc agcaaggcaa
      51  gaagagccga cgtcctcgtg ggcgttcggt ggagccccgg cttcaacggg
     101  ctccggtggc tcaggcctcc cggatatctg ggatggttcc tggtccacta
     151  tcttctaatg tctggccggt taaccgctcc gtggaattcc tgatggattt
     201  taaacggagc gccacctcgg tagatgcgac catattcaat tgtgtgccgt
     251  tcaatctacc ccgagtgtgg agtcttgcac gttgttactc cttgtggaag
     301  ccaacaaggt gggatgtcgt ctacctccct gaggtcagtg cggcaacggc
     351  tggaagtatc gagatgtgtt atctctacga ctatgccgac acagtcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg cagagggctg ccatttgtta actggcggct cagcacgcaa
     501  tgccgtggtc gcctcgatgg attgttcccg agtcgactgg aaacgcgtta
     551  ctagttcaat ccctagtgac gtggatccca acgtcgtaaa caccatactg
     601  ccggctaggc tagctgtgcg gtcgtcgatt aaaccggcgg ttgatgatac
     651  accaggcaag ctgtatgcta tcgtcagtat ggtcctgcgg gatccagttg
     701  acccaacact taacacgtga