Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1074

ACC No: FN432891

Dated: 2010-07-27 | Length: 720 | CRC: 584102297

                
ID   FN432891; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432891;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1074
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1074"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11931.1"
FT                   /translation="MARRGKKINSNQNQQGKKSRRPRGRSAEPRLQRAPVAQASRISGT
FT                   VPGPLSSNVWPINRSVEFLMDFKRSATSTEATILNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVVYLPEISAAAAGSIEMCYLYDYADTVPSDTGKMSRTAGFVTSSVWYGAEGCHLLTGG
FT                   SARNAVVASMDCSRVDWKRVTSSIPSDVDPNVVNTILPARLAVRSSIKPAVDDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
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SQ   Sequence 720 BP; 163 A; 197 C; 202 G; 158 T; 0 other;

fn432891 Length: 720  27-JUL-2010  Type: N  Check: 6604  ..

       1  atggccaggc gaggcaagaa aatcaactcc aaccaaaatc agcaaggcaa
      51  gaagagccgc cgcccccgtg ggcggtcggc ggaacctcgg cttcaacggg
     101  ctccagtggc tcaggcctcc cggatatctg ggacggttcc tggaccacta
     151  tcttctaatg tctggccgat taaccgctcc gtagaattcc tgatggattt
     201  caagcggagc gccacctcga cagaggcgac catacttaat tgtgtgccgt
     251  tcaatctgcc tcgagtgtgg agtcttgcgc gttgctactc cttgtggaag
     301  ccaacaaggt gggacgtcgt ctatctccct gagattagcg cggcagcagc
     351  tggaagtatc gagatgtgct atctctacga ctatgctgac acagtcccaa
     401  gtgacacggg caagatgagc aggacagcgg gcttcgttac ctccagcgtt
     451  tggtacggcg cggagggctg ccatttgtta actggcggct cagcacgaaa
     501  tgccgtggtt gcctcgatgg attgttcccg agtcgactgg aaacgcgtca
     551  ctagttcaat ccccagtgac gtggatccca acgttgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtcgatt aaaccggcgg ttgatgatac
     651  accaggtaaa ctgtatgcta tcgtcagtat ggtcctgcgg gacccagttg
     701  atccaacact caatacgtga