Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1122

ACC No: FN432909

Dated: 2010-07-27 | Length: 720 | CRC: -1126724279

                
ID   FN432909; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
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AC   FN432909;
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DT   27-JUL-2010 (Rel. 105, Created)
DT   27-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF4, genomic RNA, isolate Tz1122
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (27-JUL-2009) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Ird, Dgpc, BP64501, 34394 Montpellier cedex 5, FRANCE.
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RN   [2]
RA   Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT   "Recombination, selection and clock-like evolution of Rice yellow mottle
RT   virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Tz1122"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="ORF4"
FT                   /product="coat protein"
FT                   /protein_id="CBA11949.1"
FT                   /translation="MARKGKKVNSNQNQQGKKSRRPRGRSAEPRLQRAPVAQASRISGT
FT                   VPGPLSSNVWPINRSVEFLMDFKRSATSTEATILNCVPFNLPRVWSLARCYSLWKPTRW
FT                   DVVYLPEISAAAAGSIEMCYLYDYADTVPSDTGKMSRTAGFVTSSVWYGAEGCHLLTGG
FT                   SARNAVVASMDCSRVDWKRVTSSIPSGVDPNVVNTILPARLAVRSSIKPAVDDAPGKLY
FT                   AIVSMVLRDPVDPTLNT"
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SQ   Sequence 720 BP; 158 A; 193 C; 206 G; 163 T; 0 other;

fn432909 Length: 720  27-JUL-2010  Type: N  Check: 133  ..

       1  atggccagga agggcaagaa agtcaactcc aaccaaaatc agcaaggcaa
      51  gaagagtcgt cgccctcgcg ggcgttcggc ggaaccccgg cttcaacggg
     101  ctccagtggc tcaggcctcc cggatatctg ggacggttcc tggaccacta
     151  tcttctaatg tctggccgat taaccgctcc gtggaattcc tgatggattt
     201  taagcggagc gccacctcga cagaggcgac catacttaat tgtgtgccgt
     251  ttaatctgcc tcgagtgtgg agtcttgcgc gctgttactc cttgtggaag
     301  ccaacgaggt gggacgtcgt ctatctcccc gagattagtg cggcagcggc
     351  tggaagtatt gagatgtgtt atctctacga ctatgctgac acagtcccaa
     401  gtgacacggg caagatgagc aggacagcgg gcttcgtcac ctccagcgtt
     451  tggtacggcg cggagggctg ccatttgtta actggtggct cagcacgaaa
     501  tgccgtggtt gcctcgatgg attgctctcg agtcgactgg aaacgcgtta
     551  ctagctcaat ccctagtggc gtggatccca acgttgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtccatc aaaccggcgg tcgatgatgc
     651  accaggtaaa ctgtatgcta tcgtcagtat ggtcctgcgg gacccagttg
     701  atccaacact caatacgtga