Sequence of DPV East African cassava mosaic virus
East African cassava mosaic virus segment DNA-A, complete sequence, isolate EACMV-Ybi1[Cm]
ACC No: FN435280
Dated: 2010-11-10 | Length: 2799 | CRC: 552381724
ID FN435280; SV 1; linear; genomic DNA; STD; VRL; 2799 BP. XX AC FN435280; XX DT 07-JAN-2010 (Rel. 103, Created) DT 10-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE East African cassava mosaic virus segment DNA-A, complete sequence, isolate DE EACMV-Ybi1[Cm] XX KW . XX OS East African cassava mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA MONDE G.; RT ; RL Submitted (30-JUL-2009) to the EMBL/GenBank/DDBJ databases. RL MONDE G., Unite de phytopathologie, Universite catholique de Louvain, 1348, RL Louvain-la-Neuve, BELGIUM. XX RN [2] RA Monde G., Walangululu J., Winter S., Bragard C.; RT "Dual infection by cassava begomoviruses in two leguminous species RT (Fabaceae) in Yangambi, Northeastern Democratic Republic of Congo"; RL Arch. Virol. 155(11):1865-1869(2010). XX FH Key Location/Qualifiers FH FT source 1. .2799 FT /organism="East African cassava mosaic virus" FT /segment="DNA-A" FT /host="Centrosema pubescens" FT /isolate="EACMV-Ybi1[Cm]" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo:Yangambi" FT /isolation_source="host leaves" FT /collected_by="MONDE Godefroid" FT /collection_date="12-Nov-2008" FT /identified_by="Monde Godefroid" FT /db_xref="taxon:62079" FT CDS complement(1247. .1654) FT /gene="AC2" FT /product="activator of transcription protein" FT /db_xref="GOA:D2TGA1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2TGA1" FT /protein_id="CBA13515.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHRPRQEAREHEPRHHHTPDTVQPQ FT PSEGIGDSQVFSELQGLDDLTASDWSFLKSI" FT CDS complement(2252. .2485) FT /gene="AC4" FT /product="symptom expression protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2UZN6" FT /protein_id="CBA13516.1" FT /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRELNHR FT PMSKLTLKREGNFLTLDFSKSMPEVQGGRANI" XX SQ Sequence 2799 BP; 731 A; 551 C; 727 G; 790 T; 0 other; fn435280 Length: 2799 10-NOV-2010 Type: N Check: 5491 .. 1 accggatggc cgcgcccgaa aaagcaggtg gaccgcacaa tgaccgcgcc 51 cgtgaaagaa agtggtccct gcgcacttgt tttggtcggc cagtcatatt 101 cacgcgtgaa attctagata tttgttgttt gtctttatag acttcgtcgc 151 gaagtagtag agcgcgtcaa catgtgggat ccattggtga acgattttcc 201 cgaaaccgtt cacggtttcc gttctatgct tgctgttaaa tacctgttac 251 atatggaaca ggaatacgat cgcggtactg tcggggctga gtatatacgg 301 gatctaatag gggttctacg gtgtaagaat tatgtcgaag cgaccaggag 351 atataataat ctcaacaccc gtatccaagg tgcggaggag gctgaacttc 401 gacagcccat acacgaaccg tgttgttgcc cccactgtcc gcgtcaccag 451 aagcaaaata tgggccaaca ggcctatgta tcggaaaccc aagatgtaca 501 gaatgtatcg aagcccagat gtccctaagg gctgtgaagg cccatgtaag 551 gtccagtcat ttgagcagag ggatgatgtg aagcaccttg gtatctgtaa 601 ggtgattagt gatgtgacgc gtgggcctgg gctgacacac agggtcggaa 651 agaggttttg tatcaagtcc atttacattc ttggtaagat ctggatggat 701 gaaaatatta agaagcagaa tcacactaat aatgtgatgt tttacctgct 751 tagggataga aggccgtatg gcaatgcgcc ccaagacttt gggcagatat 801 ttaacatgtt tgataatgag cccagtactg caacaattaa gaacgatttg 851 agggataggt ttcaggtgtt gaggaaattt catgccactg ttgttggtgg 901 tccatctggc atgaaggagc aggcgttggt gaaaaggttt tacaagctga 951 atcatcacgt gacatataat catcaggagg cagggaagta tgagaatcac 1001 acagagaatg cgttgttatt gtatatggca tgtacacatg cctcgaatcc 1051 tgtgtatgct acgctgaaaa tacgcatcta tttttatgat gcagtgacaa 1101 attaataaag gttgaatttt attgcatgtt gctccgtaac ttggagtgtg 1151 tttagtaata catcgtacac aacatgatca acagcttgaa ggacagtgtt 1201 aatggaaata acgcctatca tatctaaata cttgagcact tgatatctaa 1251 atactcttaa gaaacgacca gtctgaggcc gtaaggtcgt ccagaccttg 1301 aagttcagaa aacacttgtg aatccccaat gccttccgaa ggttgtggtt 1351 gaaccgtatc tggagtgtga tgatgtcgtg gttcatgttc cctggcctct 1401 tgtcgtggtc ggtgatttcg aaatagaggg gatttgttat gtcccaggta 1451 aaaacgccat tccttgcttg aggcgcagtg atgagttccc ctgtgcgaga 1501 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg 1551 aggtctaccc gcctacgtct gacggccctg gtcttcgctg tgcggtgttg 1601 gactttgatg ggcactagag aacaatggct cgtggagggc gatgaaggtg 1651 gcattcttta aagcccaggc tttaagggat tggttctttt cctcgtccag 1701 aaactcttta tatgatgatg ttggtcctgg attgcagagg aagatagtgg 1751 gaatgccgcc tttaatttga attggcttcc cgtattttgt attgctttgc 1801 cagtcccttt gggcccccat caattctttg aagtgtttga ggtagtgggg 1851 gtcgacgtca tcaatgacgt tgtaccatgc gtcgtttgaa tataccttgg 1901 gagacagatc caggtgtcca caaagataat tatggggtcc cagtgaacga 1951 gcccacattg ttttgccggt tcggctatca ccttctagaa caatactgat 2001 cggtctccat ggccgcgcag cgggactgca tatattttcg gatacccata 2051 cctctatgtc ttctgggact tgtgtaaaag atgatgataa gaacggacta 2101 acgtaagttt gtggcggagc ctggaagatt ctatctgcgt tagcagatat 2151 gttatggaac tgtaaaaaaa aggactttgg atctttttct ttaataattt 2201 gaagagcttc ggatttagac gaagcattca acgcgtctgc atatacctga 2251 gctaaatgtt ggccctcccc ccttgcactt ctggcatcga cttggaaaag 2301 tccagcgtca agaaattccc ctcccttttc aatgtaagct ttgacatcgg 2351 acgatgattt agctccctga atgttcggat ggaaatgtgt tgatcgggat 2401 ggggaaatga gatcgaagaa tctcgggttg gtacattgga acttgccttc 2451 gaattggatg agaacatgga gatgaggcac cccatcctga tgtagttctc 2501 tgctaaccct aatgaatttg atattcgtcg ggtacgaaag ggcttgtaat 2551 tgggaaaggg cctcttcttt tgttaatgag catcggggat aggttatgaa 2601 ataatttttg gcatttattt gaaaacgacc ggctcttggc atattggctg 2651 tcgttttgga tcgggggaca ctcaaaactc caggggaacg gtggaatggg 2701 gggcattata tatgatgtcc cccaatggca tatgtgtaaa taggtagact 2751 tccattcaaa atttgaattc cgaatattgg cggccatccg attaatatt