Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate QS4
ACC No: FN552119
Dated: 2009-10-13 | Length: 672 | CRC: -1925592757
ID FN552119; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FN552119; XX DT 18-SEP-2009 (Rel. 102, Created) DT 13-OCT-2009 (Rel. 102, Last updated, Version 2) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate QS4 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Abou Kubaa R.; RT ; RL Submitted (17-SEP-2009) to the EMBL/GenBank/DDBJ databases. RL Abou Kubaa R., Istitutu Agronomico Mediterraneo Di Bari. via Ceglie 7., RL CAP: 70010, Valenzano-Bari, N/A, ITALY. XX RN [2] RA Abou Kubaa R., Saponari M., El-khateeb A., Yokomi R.K., Djelouah K.; RT "Molecular characterisation and genomic variabilty of Citrus tristeza virus RT (CTV) in Apulia and Syria."; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="QS4" FT /mol_type="genomic RNA" FT /country="Syria:Lattakia, Hannadi nursery" FT /isolation_source="mother trees block" FT /collected_by="Raied Abou Kubaa" FT /collection_date="20-Apr-2006" FT /PCR_primers="fwd_name: T36cp-F, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: T36cp-R, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CBE70803.1" FT /translation="MDDETKKLKNKNKETKEDDNVVAAESSFGSVNLHIDPTLIAMNDV FT RRLSTQHNVALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 192 A; 123 C; 173 G; 184 T; 0 other; fn552119 Length: 672 13-OCT-2009 Type: N Check: 4536 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 agacgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtcg gttgagtacc 151 caacacaatg tcgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga