Sequence of DPV Citrus tristeza virus
Citrus tristeza virus CP gene for coat protein, genomic RNA, isolate A211
ACC No: FN661499
Dated: 2010-01-28 | Length: 672 | CRC: -663614379
ID FN661499; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FN661499; XX DT 21-JAN-2010 (Rel. 103, Created) DT 28-JAN-2010 (Rel. 103, Last updated, Version 3) XX DE Citrus tristeza virus CP gene for coat protein, genomic RNA, isolate A211 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Abou Kubaa R.; RT ; RL Submitted (20-JAN-2010) to the EMBL/GenBank/DDBJ databases. RL Abou Kubaa R., Dept Integrated Pest Management, Mediterranean Agronomic RL Institute of Bari. Via Ceglie 9, 70010 Valenzano-Bari, ITALY XX RN [2] RA Abou Kubaa R., Saponari M., D'Onghia A., Martelli G.; RT "Characterization and genomic variabilty of citrus tristeza virus (CTV) RT isolates recovered in Apulia and Syria."; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="A211" FT /mol_type="genomic RNA" FT /country="Italy:Apulia" FT /collected_by="Maria Saponari" FT /collection_date="12-May-2008" FT /PCR_primers="fwd_name: T36cp+, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: T36cp-, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="CP" FT /product="coat protein" FT /protein_id="CBJ19301.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKRWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 196 A; 123 C; 171 G; 182 T; 0 other; fn661499 Length: 672 28-JAN-2010 Type: N Check: 3925 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgtcgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 acgttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgctgg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga