Sequence of DPV Citrus tristeza virus
Citrus tristeza virus CP gene for coat protein, genomic RNA, isolate SYR-B59
ACC No: FN667583
Dated: 2010-03-02 | Length: 672 | CRC: -1025809423
ID FN667583; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FN667583; XX DT 02-MAR-2010 (Rel. 104, Created) DT 02-MAR-2010 (Rel. 104, Last updated, Version 1) XX DE Citrus tristeza virus CP gene for coat protein, genomic RNA, isolate DE SYR-B59 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Abou Kubaa R.; RT ; RL Submitted (05-FEB-2010) to the EMBL/GenBank/DDBJ databases. RL Abou Kubaa R., Integrated Pest Management, Mediterranean Agronomic Institue RL of Bari, Via Ceglie, 9, Valenzano, 70010, ITALY. XX RN [2] RA Abou Kubaa R., Kumari S., Saponari M., Djeluah K., D'onghia A.M.; RT "Citrus tristeza virus in Syria, state of the art"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sinensis" FT /isolate="SYR-B59" FT /mol_type="genomic RNA" FT /country="Syria:Lattakia-Video nursery" FT /collected_by="Raied Abou Kubaa" FT /collection_date="15-Jun-2008" FT /identified_by="Raied Abou Kubaa" FT /PCR_primers="fwd_name: T36CP-F, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: T36CP-R, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="CP" FT /product="coat protein" FT /protein_id="CBK19531.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLIAMNDV FT RRLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGHHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 123 C; 176 G; 183 T; 0 other; fn667583 Length: 672 02-MAR-2010 Type: N Check: 5310 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtcg gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggcatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga