Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q96, clone 4
ACC No: FR871861
Dated: 2011-06-26 | Length: 672 | CRC: 1105237949
ID FR871861; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871861; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q96, clone 4 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q96" FT /mol_type="genomic RNA" FT /country="Croatia" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="2005" FT /identified_by="Yahiaoui Dorsaf" FT /clone="4" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84724.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLPDKGKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTDDALYLAFCRQNRNLSYGGRP FT LDAGIPTGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 130 C; 167 G; 178 T; 0 other; fr871861 Length: 672 26-JUN-2011 Type: N Check: 9572 .. 1 ttggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata acgatgaatg acgtgcgtca gttgagtacc 151 caacagaacg ctgctttaaa cagagacttg tttcttactt tgaaagggaa 201 gtatcctaac ttacctgaca aaggtaagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact 301 acgggcataa cgtacactcg ggagggtgtt gaagtggatt tgtccgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactgacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccgacc gggtaccatt acctgtgtgc agatttcttg accggagctg 551 gcttgacaga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga