Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q106, clone 8
ACC No: FR871864
Dated: 2011-06-26 | Length: 672 | CRC: 11239710
ID FR871864; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871864; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q106, clone 8 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q106" FT /mol_type="genomic RNA" FT /country="Serbia and Montenegro" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="2005" FT /identified_by="Yahiaoui Dorsaf" FT /clone="8" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84727.1" FT /translation="MDDETKKLKNKNKETREGDDVVAAESSFGSLNLHIDPTLITMNDV FT RQLSTQRNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVLNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 129 C; 168 G; 178 T; 0 other; fr871864 Length: 672 26-JUN-2011 Type: N Check: 141 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgagaga 51 aggtgacgat gttgttgctg ctgagtcttc tttcggctcc ttaaacttac 101 acatcgatcc aactctgata acgatgaatg acgtgcgtca gttgagtacc 151 caacggaacg ctgcattaaa cagagacttg tttcttactt tgaaagggaa 201 gtatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcgt tacaaagcga tgacgacact 301 acgggcataa catacactcg ggagggtgtt gaagtggatt tgtccgataa 351 actttggact gacgtcgtgc ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtaccatt acttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga