Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q109, clone 1
ACC No: FR871866
Dated: 2011-06-26 | Length: 672 | CRC: -738979656
ID FR871866; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871866; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q109, clone 1 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q109" FT /mol_type="genomic RNA" FT /country="Serbia and Montenegro" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="2005" FT /identified_by="Yahiaoui Dorsaf" FT /clone="1" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84729.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGTINLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 204 A; 127 C; 162 G; 179 T; 0 other; fr871866 Length: 672 26-JUN-2011 Type: N Check: 1700 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaataagg aaacgaaaga 51 aggcgatgac gttgttgccg ctgaatcttc tttcggtacc ataaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa tagagactta tttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaaa agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaactt aagttatggc ggacgtccgt tagatgcagg 501 gattccagcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagttgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga