Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q57, clone 1
ACC No: FR871875
Dated: 2011-06-26 | Length: 672 | CRC: 1968634258
ID FR871875; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871875; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q57, clone 1 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q57" FT /mol_type="genomic RNA" FT /country="Egypt" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="2001" FT /identified_by="Yahiaoui Dorsaf" FT /clone="1" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84738.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSANLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKWKYPSLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 192 A; 121 C; 175 G; 184 T; 0 other; fr871875 Length: 672 26-JUN-2011 Type: N Check: 5117 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc tttcggttcc gcgaatttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggaacc 151 caacagaacg ctgctttgaa cagagatttg tttcttactc tgaaatggaa 201 gtatcctagc ttgtctgaca aggataagga cttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa 351 gctttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt acctatgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaatta 601 ttaaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga