Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q75, clone 2
ACC No: FR871878
Dated: 2011-06-26 | Length: 672 | CRC: 1843509304
ID FR871878; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871878; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q75, clone 2 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q75" FT /mol_type="genomic RNA" FT /country="Morocco" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="2005" FT /identified_by="Yahiaoui Dorsaf" FT /clone="2" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84741.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDNDFHLAMMLYRLAVKSSSLQSDDDTTGVT FT YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVNIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 126 C; 170 G; 177 T; 0 other; fr871878 Length: 672 26-JUN-2011 Type: N Check: 2531 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgcag ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg acgtgcgtca gttgggtacc 151 caacagaatg ctgctttgaa tagagatttg tttcttacct tgaaagggaa 201 gtatcctaac ttacctgaca aagacaatga ctttcactta gctatgatgt 251 tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgatacc 301 acgggtgtga cgtacactcg ggaaggtgtt gaagtggaat tgtctgacaa 351 actttggaca gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt 451 tgtaggcaga accgcaactt gagttatggt ggacgtccgt tagatgcagg 501 aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg 551 ggttgactga tttagaatgt gcagtgaaca tacaagctaa agagcaatta 601 ctaaaaaagc gaggggctga tgaggtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga