Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q52, clone 1
ACC No: FR871882
Dated: 2011-06-26 | Length: 672 | CRC: -2064542679
ID FR871882; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871882; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q52, clone 1 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q52" FT /mol_type="genomic RNA" FT /country="Gaza Strip" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="1999" FT /identified_by="Yahiaoui Dorsaf" FT /clone="1" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84745.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLIAMNDV FT RRLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGAARVVVTNVRKLGKFNT FT R" XX SQ Sequence 672 BP; 189 A; 124 C; 176 G; 183 T; 0 other; fr871882 Length: 672 26-JUN-2011 Type: N Check: 4581 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctgata gcgatgaacg atgtgcgtcg gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctgc tcgagtcgta gttaccaatg tcaggaagct 651 tgggaaattc aacacacgtt ga