Sequence of DPV Citrus tristeza virus
Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate MAIB_Q44, clone 1
ACC No: FR871883
Dated: 2011-06-26 | Length: 672 | CRC: -2114907605
ID FR871883; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC FR871883; XX DT 26-JUN-2011 (Rel. 109, Created) DT 26-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate DE MAIB_Q44, clone 1 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA YAHIAOUI D.; RT ; RL Submitted (24-MAY-2011) to the INSDC. RL Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest RL Management, Via Ceglie, 9, 70010, ITALY. XX RN [2] RA Yahiaoui D., Djelouah K., D'Onghia A., Catara A.; RT "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA RT populations"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /isolate="MAIB_Q44" FT /mol_type="genomic RNA" FT /country="Gaza Strip" FT /collected_by="Mediterranean Agronomic Institute of Bari" FT /collection_date="1999" FT /identified_by="Yahiaoui Dorsaf" FT /clone="1" FT /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq: FT atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq: FT tcaacgtgtgttgaatttccca" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /gene="p25" FT /product="coat protein" FT /protein_id="CCB84746.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLVAMNDV FT RRLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVGLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 190 A; 122 C; 176 G; 184 T; 0 other; fr871883 Length: 672 26-JUN-2011 Type: N Check: 4598 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgcag cggagtcttc tttcggttct gtaaacttac 101 acatcgatcc gactctggta gcgatgaacg atgtgcgtcg gttgggtacc 151 caacagaatg ccgctttgaa cagagatttg tttcttactt tgaaagagaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tgcaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtgggtt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt aggactaacg atgcccttta tttagccttt 451 tgtagacaga atcgcaattt aagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt atctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga