Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CT-W4 p20 gene, complete cds.

ACC No: GQ338633

Dated: 2012-01-02 | Length: 549 | CRC: -962813285

                
ID   GQ338633; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
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AC   GQ338633;
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DT   02-JAN-2012 (Rel. 111, Created)
DT   02-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CT-W4 p20 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-549
RA   Yi L., Zhou C.Y., Zhou Y.;
RT   "Origin and evolution of viruses causing Citrus tristeza disease";
RL   Unpublished.
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RN   [2]
RP   1-549
RA   Yi L., Zhou C.Y., Zhou Y.;
RT   ;
RL   Submitted (30-JUN-2009) to the INSDC.
RL   Citrus Research Institute, Chinese Academy of Agricultural Science, Xiema,
RL   Beibei, Chongqing 400712, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus medica"
FT                   /isolate="CT-W4"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .549
FT                   /codon_start=1
FT                   /product="p20"
FT                   /protein_id="ADH95345.1"
FT                   /translation="MRAYFSVNDYISLLAKVGSVVERLCDPSISLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRVLLDIIRRRFTREKLLCTSATD
FT                   VVGFFVMRYMSSSHTSFETVMRTELKLVVKAVLSDLSRTHKLDFSERAFAAYGILLQKG
FT                   TVATVCGQFDINLVSPSCV"
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SQ   Sequence 549 BP; 133 A; 109 C; 140 G; 167 T; 0 other;

gq338633 Length: 549  02-JAN-2012  Type: N  Check: 7134  ..

       1  atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt
      51  tggttcagtt gtggagcgtt tatgcgatcc cagcatatct ctcacggaag
     101  tgatggacga aattaatgat tttaactcgt ttctcgcttt ggtgcactct
     151  atgaagtcgg acatgaacgg tgatcatcag gatggtcacc atgagatggg
     201  tgaacataag tctcggttat tgtgcaatat agaggcgaaa ctgcgagtgc
     251  ttctcgacat cataagacgt cggtttactc gcgaaaaact gctctgtacc
     301  agtgctacag atgtcgtggg cttcttcgtc atgaggtaca tgagttctag
     351  tcacactagt ttcgaaaccg taatgcgaac ggaactgaag ttagtggtta
     401  aagctgtgct gtcggatttg tcccgcacgc ataaactaga ttttagcgag
     451  cgagcctttg cggcttacgg tatccttttg caaaagggta ccgtggcaac
     501  cgtttgcggt cagtttgaca ttaatttagt ttctccatct tgcgtgtag