Sequence of DPV Tomato leaf curl Hainan virus
Tomato leaf curl Vietnam virus isolate Hung Yen segment DNA A, complete sequence.
ACC No: GQ338766
Dated: 2009-07-29 | Length: 2743 | CRC: -1513171453
ID GQ338766; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC GQ338766; XX DT 29-JUL-2009 (Rel. 101, Created) DT 29-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato leaf curl Vietnam virus isolate Hung Yen segment DNA A, complete DE sequence. XX KW . XX OS Tomato leaf curl Vietnam virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Thanh T.N., Vinh D.N., Mukheerjee S.M.; RT ; RL Submitted (29-JUN-2009) to the EMBL/GenBank/DDBJ databases. RL Plant Molecular Biology, International Centre For Genetic Engineering and RL Biotechnology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India XX FH Key Location/Qualifiers FH FT source 1. .2743 FT /organism="Tomato leaf curl Vietnam virus" FT /segment="DNA A" FT /host="tomato" FT /isolate="Hung Yen" FT /mol_type="genomic DNA" FT /country="Viet Nam:Khoai Chau, Hung Yen" FT /collection_date="12-Jan-2008" FT /db_xref="taxon:208177" FT gene 132. .482 FT /gene="AV2" FT CDS 132. .482 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /protein_id="ACT79065.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLLRDL FT ISVIRAKDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVQNVQKP" FT gene 292. .1065 FT /gene="AV1" FT CDS 292. .1065 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ACT79066.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVVHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNIHVTYNHQEAAKYDN FT PPENALLLYMACTHASHLVYATLKIRIYFYDSVQN" FT gene complement(1062. .1466) FT /gene="AC3" FT CDS complement(1062. .1466) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /protein_id="ACT79067.1" FT /translation="MDSRTGEAITATQAESGVYIWTVKNPLYFKIISHDERPFLMNNDI FT ITIQVQFNYNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACDHVLWDVLEKTEFVTLPNIIKFILY" FT gene complement(1207. .1611) FT /gene="AC2" FT CDS complement(1207. .1611) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="suppressor" FT /protein_id="ACT79068.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRNAKKATRRRRVDLPCGCSYFIALG FT CHNHGFSHRGSYHCNSSREWRIYLDGQKSPIFQDNQPRRETISDEQRHHHNTSPIQLQP FT EESVGNTPMFSNLPDLDSFTSSDLAFLKSI" FT gene complement(1514. .2599) FT /gene="AC1" FT CDS complement(1514. .2599) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /protein_id="ACT79069.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLISPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGLFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKIWAIKNAIFVTLQGAL FT YSGSYQSATPQRQESNEETES" FT gene complement(2149. .2442) FT /gene="AC4" FT CDS complement(2149. .2442) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="ACT79070.1" FT /translation="MELLTCMFSSNSKGNSNVKTKDSSISYPQAGQHISIRTFRQLKAQ FT QMSSPIWTKTETCLIMDFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2743 BP; 742 A; 542 C; 608 G; 851 T; 0 other; gq338766 Length: 2743 29-JUL-2009 Type: N Check: 8681 .. 1 accggatggc cgcgattttt tttacatggt ccccaccact aacaaatgtc 51 ctccacttag aacgctccct caaagcctat ttaattcaaa tccattatat 101 atacttggtc cccaagtact cactttaaaa tatgtgggat cctttactga 151 atgagtttcc cgaaaccgta cacggtttta ggtgtatgtt agcgattaaa 201 tatttgcaat tagtagaaaa tacatactct cctgatacat tagggtacga 251 tttgcttcgt gatttaattt cagttattcg tgctaaggac tatgtcgaag 301 cgtcccgcag atatagtcat ttccactccc gcatccaagg tgcgtcgccg 351 gctgaatttc gacagcccgt atgccagccg tgctgctgcc cccactgtcc 401 tcgtcacaaa caaaaggagg tcatgggtga atcggcccat gtaccgaaag 451 cccaggatgt acagaatgta caaaagccct gatgttcctc gaggatgtga 501 aggcccatgt aaggttcagt cctatgaaca gcgtcatgat gtagtgcacg 551 taggtaaagt catttgtgtg tcggatgtta ctcgtggtaa cgggttgact 601 catcgagtgg gaaagaggtt ttgtgttaag tctgtttatg ttttgggcaa 651 gatatggatg gatgagaaca ttaagaccaa gaatcatact aatactgtga 701 tgtttttttt agtgcgtgat aggagaccat ttgggactcc acaggatttt 751 ggtcaggtgt ttaacatgta tgataacgag ccaagtacag ccacggtgaa 801 gaacgacaac agagatcgct ttcaagttct acggcgtttt caggctactg 851 ttactggtgg tcagtatgca agtaaggagc aagcaatagt taggaagttt 901 atgaaggtga acatccatgt gacgtataat catcaagaag ctgcgaagta 951 tgacaatcca ccagagaatg ctcttttgtt gtatatggca tgtacccatg 1001 ctagtcatct ggtgtatgct acattgaaaa tcagaatcta tttctatgat 1051 tctgttcaga attaataaag gatgaatttt attatatttg gaagtgttac 1101 aaattctgtt ttttccaata catcccataa tacatgatca catgctctaa 1151 ttacattgtt aatactaatt acacccaaat tatctaaata tttcatacat 1201 tgaaccctaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt 1251 ccagatctgg aagattagaa aacattggtg tattcccaac gctttcctca 1301 ggttgtaatt gaattggact tgtattgtga tgatgtcgtt gttcatcaga 1351 aatggtctct cgtcgtggct gattatcttg aaatataggg gatttttgac 1401 cgtccagata tatacgccac tctctgcttg agttgcagtg atagcttccc 1451 ctgtgcgaga atccatgatt gtgacagcct agtgcaatga agtatgaaca 1501 gccacaaggg agatcaactc tccgtctcct cgttgctttc ttggcgttgc 1551 ggtgttgcac tttgatagga acctgagtag agtgcgcctt ggagggtgac 1601 gaagatcgca ttttttattg cccagatttt aagtgcgctg ttcttatctt 1651 cgtccaagaa ttctttatag cttgaattgg ggccgggatt gcagaggaag 1701 atagtgggaa ttcccccttt aatttgaacg ggttttccgt actttgtgtt 1751 gctttgccag tccctttggg cccccatgaa ttctttaaaa tgctttaggt 1801 agtgcggatc gacgtcatca atgacgttgt accaggcatc attattgtat 1851 accttcggac ttaaatcaag atgaccacac aaataattat gtggtcctaa 1901 tgacctagcc cacatcgtct ttcccgtccg actatcgcct tcgataacta 1951 tacttatcgg tcttaaaggc cgcgcagcgg cactgacaac gttctctgca 2001 gcccactctt cgagttcctc tggaactcga tcaaaggaag aagaagaaaa 2051 aggcgaaaca taaacctcca ttggaggagt aaaaatccta tctaaattat 2101 tatttaaatt atgaaactgt aaaacataat ctttaggtgc cttttccctt 2151 agtatattga gggccgaagc tttggaccct gaattgattg cctcggcata 2201 tgcgtcgttg gcagattggc aacctcctct agccgatctt ccatcgatct 2251 ggaaaagtcc atgatcaagc acgtctccgt ctttgtccat ataggacttg 2301 acatctgttg agcttttagc tgcctgaatg ttcggatgga aatgtgctga 2351 cctgcttggg gatatgagat cgaagaatct ttggttttta cattggaatt 2401 tcccttcgaa ttggatgaga acatgcaggt gaggagttcc atcttcgtgg 2451 aattctctgc agatgcggat aaatagttta tttactgggg tttctaggtt 2501 tttaagttgg gaaagtgctt cttctttagt gagagagcag tgtggatatg 2551 tgaggaaata atttttggca tttattctga atttattagg aggagccatt 2601 gactggtcaa tcggtgtctc ataaacttgg ctatgcaatt ggtgtctggt 2651 gtcttattta tatgtggaca ccaaatggca ttatcgtaat tcccaaaaga 2701 aattcaaaat tcaaattggt aaagcggcca tccgtataat att