Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate RIV 11-3 major coat protein (CP) gene, complete cds.
ACC No: GQ424358
Dated: 2009-09-13 | Length: 672 | CRC: -1533216455
ID GQ424358; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC GQ424358; XX DT 13-SEP-2009 (Rel. 102, Created) DT 13-SEP-2009 (Rel. 102, Last updated, Version 1) XX DE Citrus tristeza virus isolate RIV 11-3 major coat protein (CP) gene, DE complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Saponari M., Yokomi R.K.; RT "Genetic diversity of Citrus tristeza virus isolates collected recently in RT California"; RL Unpublished. XX RN [2] RP 1-672 RA Saponari M., Yokomi R.K.; RT ; RL Submitted (28-JUL-2009) to the EMBL/GenBank/DDBJ databases. RL ARS-USDA, San Joaquin Valley Agricultural Sciences Center, 9611 S. RL Riverbend, Parlier, CA 93648, USA XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="RIV 11-3" FT /mol_type="genomic RNA" FT /country="USA:Southern California, Riverside" FT /note="genotype: T30-like" FT /db_xref="taxon:12162" FT gene 1. .672 FT /gene="CP" FT CDS 1. .672 FT /codon_start=1 FT /gene="CP" FT /product="major coat protein" FT /note="P25" FT /protein_id="ACV53863.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 121 C; 170 G; 184 T; 0 other; gq424358 Length: 672 13-SEP-2009 Type: N Check: 4341 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggtgacgat gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga