Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CB1 P27 gene, partial cds.

ACC No: GQ475053

Dated: 2009-09-29 | Length: 725 | CRC: 1484942716

                
ID   GQ475053; SV 1; linear; genomic RNA; STD; VRL; 725 BP.
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AC   GQ475053;
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DT   29-SEP-2009 (Rel. 102, Created)
DT   29-SEP-2009 (Rel. 102, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CB1 P27 gene, partial cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-725
RA   Santos F.A., Souza A.A., Coletta Filho H.D., Natividade Targon M.L.P.,
RA   Peroni L.A., Carvalho D.A., Machado M.A.;
RT   "Evidence of synergism between subisolates of Citrus tristeza virus in
RT   Mexican lime";
RL   Unpublished.
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RN   [2]
RP   1-725
RA   Santos F.A., Souza A.A., Coletta Filho H.D., Natividade Targon M.L.P.,
RA   Peroni L.A., Carvalho D.A., Machado M.A.;
RT   ;
RL   Submitted (04-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Centro de Citricultura Sylvio Moreira, Instituto Agronomico, Rod.
RL   Anhanguera km 158, Cordeiropolis, SP 13490-970, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .725
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis L. Osb."
FT                   /isolate="CB1"
FT                   /mol_type="genomic RNA"
FT                   /country="Brazil"
FT                   /collection_date="05-May-1998"
FT                   /db_xref="taxon:12162"
FT   CDS             4. .>725
FT                   /codon_start=1
FT                   /product="P27"
FT                   /protein_id="ACV92794.1"
FT                   /translation="MAGHTILPKTDDKEMDPVSAAVPGKYPDVIEKFVANRSVDTLIEG
FT                   VISKLDTNSIYEDSTEKFTGEYLKYVMVTMDTFLLENYKTKTEDLLVHLAMIQKRLCTI
FT                   STSTKTKFRDKGCISYVQGGLRYKLLDKVVFPFIISKFTDRETPNALRKYACTFEELHL
FT                   CMARLRPDLYENKRTTKAGTPHLKGYLSADFLSGSLPGYSEHERGIILRASESMLARRQ
FT                   GYEEATELLNLRDLGKYY"
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SQ   Sequence 725 BP; 223 A; 129 C; 163 G; 210 T; 0 other;

gq475053 Length: 725  29-SEP-2009  Type: N  Check: 8934  ..

       1  atcatggcag gtcatacaat acttcctaag actgatgata aagaaatgga
      51  tccggtgagt gccgctgtgc ccggtaagta cccggatgtt attgaaaaat
     101  ttgtggcaaa taggtctgta gatacgttaa tagaaggcgt tataagtaag
     151  ttggatacca attcgatata cgaagattcc actgaaaagt ttactggtga
     201  gtacttaaag tacgttatgg ttactatgga cactttctta ttagaaaact
     251  ataaaacgaa aacggaagat ctgttagttc acttagctat gatccaaaag
     301  aggttatgca ccatatccac gagtactaaa actaagttcc gcgataaggg
     351  ttgtattagt tacgtacaag gaggtttacg atacaagtta ttggataaag
     401  tggtttttcc ttttattata tcgaaattta ccgacaggga gactccgaat
     451  gctctacgta agtatgcttg cactttcgag gagttacact tatgtatggc
     501  tagattaaga cccgacctat acgagaataa aaggacgacc aaggctggga
     551  ctccacattt aaaaggttac ttatcagctg actttctttc gggttctctc
     601  ccagggtact ctgagcatga acgaggcatt attcttcgag cgtccgaatc
     651  tatgttagct agacgtcaag gttacgagga ggcaaccgag cttcttaacc
     701  tacgtgattt gggtaagtac tatag