Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate K27 coat protein gene, complete cds.
ACC No: GQ475554
Dated: 2012-08-02 | Length: 672 | CRC: -1457974818
ID GQ475554; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC GQ475554; XX DT 19-OCT-2009 (Rel. 102, Created) DT 02-AUG-2012 (Rel. 113, Last updated, Version 3) XX DE Citrus tristeza virus isolate K27 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 22562224. RA Biswas K.K., Tarafdar A., Diwedi S., Lee R.F.; RT "Distribution, genetic diversity and recombination analysis of Citrus RT tristeza virus of India"; RL Virus Genes 45(1):139-148(2012). XX RN [2] RP 1-672 RA Biswas K.K., Tarafdar A., Kumari S.; RT "Molecular variability in CTV isolates from Darjeeling Hills of RT Northeastern Himalayan region of India"; RL Unpublished. XX RN [3] RP 1-672 RA Tarafdar A., Biswas K.K., Kumari S.; RT ; RL Submitted (03-AUG-2009) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, New RL Delhi, Delhi 110012, India XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus reticulata" FT /isolate="K27" FT /mol_type="genomic RNA" FT /country="India" FT /collected_by="Kajal K Biswas" FT /collection_date="2007" FT /identified_by="Kajal K Biswas" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D0EDH8" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:D0EDH8" FT /protein_id="ACX55604.1" FT /translation="MDDETKKLKNKNKEAKDGDDVVAAESSFGSITLHIDPTLIGINNV FT RQLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPGRGHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 189 A; 119 C; 178 G; 186 T; 0 other; gq475554 Length: 672 02-AUG-2012 Type: N Check: 7804 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga 51 tggcgacgat gttgttgcag cggagtcttc tttcggttct ataactttac 101 acatcgatcc gactctgata ggaataaaca atgtgcgtca gttgggtacc 151 caacaaaatg ccgctttgaa cagagatttg tttcttactt tgaaagggaa 201 gtatcctaat ttgtctgata aggataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacact 301 acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aatcgtgcta 401 acgcccttcg agtctggggt aggactaacg atgccctcta tttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccgggc cggggtcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattt aacacacgtt ga