Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate P10 coat protein gene, complete cds.
ACC No: GQ475568
Dated: 2012-08-02 | Length: 672 | CRC: 140056139
ID GQ475568; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC GQ475568; XX DT 19-OCT-2009 (Rel. 102, Created) DT 02-AUG-2012 (Rel. 113, Last updated, Version 3) XX DE Citrus tristeza virus isolate P10 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RX PUBMED; 22562224. RA Biswas K.K., Tarafdar A., Diwedi S., Lee R.F.; RT "Distribution, genetic diversity and recombination analysis of Citrus RT tristeza virus of India"; RL Virus Genes 45(1):139-148(2012). XX RN [2] RP 1-672 RA Biswas K.K., Kumari S., Tarafdar A.; RT "Molecular variability in CTV isolates from central region of India"; RL Unpublished. XX RN [3] RP 1-672 RA Biswas K.K., Kumari S., Tarafdar A.; RT ; RL Submitted (04-AUG-2009) to the INSDC. RL Division of Plant Pathology, Indian Agricultural Research Institute, New RL Delhi, Delhi 110012, India XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus reticulata (Nagpur mandarin)" FT /isolate="P10" FT /mol_type="genomic RNA" FT /country="India:Katol, Maharashtra" FT /collected_by="Kajal K Biswas" FT /collection_date="2007" FT /identified_by="Kajal K Biswas" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D0EDJ2" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:D0EDJ2" FT /protein_id="ACX55618.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 196 A; 128 C; 169 G; 179 T; 0 other; gq475568 Length: 672 02-AUG-2012 Type: N Check: 997 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ccgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca gttgggcacc 151 caacagaacg ctgctttgaa cagagactta ttccttactt tgaaagggaa 201 gtatcctaac ttacctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacgcc 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgataa 351 actttggacc gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgcagacaga atcgcaattt gagttacggc ggacgtccgc tagacgcagg 501 gattccggcc gggtaccatt acttgtgtgc agatttcttg actggagctg 551 gtttgactga cttagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga