Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate CP16 coat protein gene, complete cds.

ACC No: GQ865603

Dated: 2010-09-13 | Length: 1041 | CRC: 439057449

                
ID   GQ865603; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GQ865603;
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DT   13-SEP-2010 (Rel. 106, Created)
DT   13-SEP-2010 (Rel. 106, Last updated, Version 1)
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DE   Citrus tristeza virus isolate CP16 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-1041
RA   Tzeng D.D.-S., Tarng Y.-K.;
RT   "Molecular cloning of coat protein gene of citrus tristeza virus in Taiwan
RT   and its application in virus detection";
RL   Unpublished.
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RN   [2]
RP   1-1041
RA   Tzeng D.D.-S., Tarng Y.-K.;
RT   ;
RL   Submitted (02-SEP-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, National Chung-Hsing University, No. 250, Kuo-Kuang Road,
RL   Taichung 40227, Taiwan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus medica L. (citron)"
FT                   /isolate="CP16"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /collection_date="Jul-1994"
FT                   /db_xref="taxon:12162"
FT   CDS             204. .875
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADM86125.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFSSVNLHIDPTLITMNDV
FT                   RQLSTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWADVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 1041 BP; 284 A; 185 C; 265 G; 307 T; 0 other;

gq865603 Length: 1041  13-SEP-2010  Type: N  Check: 917  ..

       1  atgaacgagg tattattctt cgagcgtctg agtctatgtt agctagacgt
      51  caaggttacg aggaggcaac cgagcttctt aacatacgtg atttgggtaa
     101  gtacttgtag ttggtttggg gacggtagta ttatactatc ccgtgagcgc
     151  tgctttaagg gtcgttaatt gacgactctt gatatattta ctagatttga
     201  attatggacg acgaaacaaa gaaattgaag aacaaaaaca aggaaacgaa
     251  agaaggcgac gatgttgttg cagccgagtc ttctttcagt tccgtaaact
     301  tacacatcga tccgactttg ataacgatga acgatgtgcg tcagttaagt
     351  acccaacaga acgctgcttt gaacagagac ttattcctta ctttgaaagg
     401  gaagtatcct aacttacctg ataaagataa ggactttcac atagctatga
     451  tgttgtatcg tttagcagtt aagagttcat cattacaaag cgatgacgac
     501  accacaggta taacgtacac tcgggagggt gttgaagtgg atttgtctga
     551  caaactttgg gctgacgtgg tgtttaactc taagggtatt ggtaaccgta
     601  ctaacgccct tcgagtttgg ggtagaacta acgatgccct ttacttagct
     651  ttttgcagac agaatcgcaa tttgagttat ggcggacgtc cgctagacgc
     701  agggattccg gccgggtatc attacttgtg tgcggatttc ttgactgggg
     751  ctggtttgac tgatttagaa tgtgctgtgt acatacaagc taaagaacaa
     801  ttattgaaga agcgaggggc tgatgaagtc gtagttacta atgtcaggca
     851  gcttgggaaa tttaacacac gttgatctgt tgcgttccga tacccggttt
     901  ctatcgggat ggtgaagttt catcgtgaac gtgggtgaca taatcgtccg
     951  gttcgcgtta cacgttccta gtgaagatat gctgaatagc ttttcagcta
    1001  tatcgaattg tacgattata gcggacgggt agtgctttac t