Sequence of DPV Bhendi yellow vein betasatellite
Bhendi yellow vein mosaic betasatellite [India:Karnal:OY80A:2006], complete sequence.
ACC No: GU111979
Dated: 2012-05-20 | Length: 1372 | CRC: -817012424
ID GU111979; SV 1; circular; genomic DNA; STD; VRL; 1372 BP.
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AC GU111979;
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DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
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DE Bhendi yellow vein mosaic betasatellite [India:Karnal:OY80A:2006], complete
DE sequence.
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KW .
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OS Bhendi yellow vein mosaic betasatellite [India:Karnal:OY80A:2006]
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Betasatellites.
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RN [1]
RC Publication Status: Online-Only
RP 1-1372
RX PUBMED; 22188644.
RA Venkataravanappa V., Reddy C.N., Swaranalatha P., Jalali S., Briddon R.W.,
RA Reddy M.K.;
RT "Diversity and phylogeography of Begomovirus-associated beta satellites of
RT Okra in India";
RL Virol J 8:555-555(2011).
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RN [2]
RP 1-1372
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Jalali S.,
RA Swaranalatha P., Krishnareddy M.;
RT ;
RL Submitted (25-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
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FH Key Location/Qualifiers
FH
FT source 1. .1372
FT /organism="Bhendi yellow vein mosaic betasatellite
FT [India:Karnal:OY80A:2006]"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY80A"
FT /mol_type="genomic DNA"
FT /country="India:Karnal, Haryana"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:908076"
FT gene complement(192. .614)
FT /gene="C1"
FT CDS complement(192. .614)
FT /codon_start=1
FT /gene="C1"
FT /product="C1 protein"
FT /db_xref="InterPro:IPR018583"
FT /db_xref="UniProtKB/TrEMBL:E7BNC3"
FT /protein_id="ADQ55872.1"
FT /translation="MKISIHFIYKFISSIYIRRTIKMTRFSKNREGIVFKVDVKLMQQQ
FT RISVQMQISSTRSPAISTKTFIIDYTYQQLHIPFDFNGLEGTITSTFKFHYWGSKAEEI
FT LEEDIIHMVDIIIIENPQTMGMDVNEPLTIDNKIII"
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SQ Sequence 1372 BP; 450 A; 221 C; 294 G; 407 T; 0 other;
gu111979 Length: 1372 20-MAY-2012 Type: N Check: 4077 ..
1 accgtgggcg agcggagtct gagtcgctgt gggacccact tatgaatgaa
51 gttcatggga gatttcaagt atatggagga aattgtggat gagaaagaga
101 aaaagtgaat gcgtgtgagt tctggcggat cattgtagaa tagcagtcca
151 cgtattacta attggtatgc caagcgtatt actgacagaa attaaattat
201 tatcttattg tcgatagtta agggttcgtt gacgtccatt cccatggttt
251 gtgggttttc aataataata atatccacca tatgtatgat gtcttcttct
301 aatatttctt ctgcttttga gccccagtaa tgaaacttga aggttgatgt
351 gatcgttcct tctaaaccgt tgaagtcgaa tggaatatgt aattgttggt
401 atgtatagtc gatgatgaat gtttttgttg atattgctgg agatcttgtt
451 gaactgatct gcatctggac tgatatcctt tgttgttgca tgagcttgac
501 atctactttg aagacgatcc cctccctgtt tttgctgaac cttgtcattt
551 tgattgtgcg tctaatgtat atgcttgaaa tgaatttata gatgaaatgt
601 atagatattt tcatataatg tgtggatatc atgaaatgta tagatatttt
651 catataatgt gtggatatca tttcataatt atcctgaatc aaagaaaagt
701 catgagaagt tcccttattg agctcagaaa tacggaagga cataaagttc
751 agccaagaaa ctaccatctt caaataaact cagccgataa gaaaaagtaa
801 agaggaaata gaggaaaaat gaaaccagaa agaaaggaag aaagaatata
851 tatataaact aggaaaaaaa aaaagggagc gcatcgataa aaaaaagcgg
901 atagaaagaa ataaccaaat ccaaaaaaaa agaaattcac aaataaaaga
951 aaaagaaaaa atccgaggtc aaaacgaagc cgttttgagg aggaagagga
1001 aagagaacgt tctatttata ttttttacca ttcactgcgt ggtaaatggt
1051 aaatagtaaa tgagtgggta aattagacat acaccgatag gtaaatgaga
1101 caccgatata tcggtactca attggtacct ctggggtctt ataaagtgct
1151 tgtttaccat tttgccccta cttttaagtt atatcgcgcg tcgtagtgcg
1201 cttaaaaagt tatcttctct ctcttcagtt ccgataaaaa cctaatttcc
1251 cgatgatcgg agtccaattt tccgacacgc gcggcggcgt gtacccctgg
1301 gacggtaggt accactacgc tacgcagcag ccttagctac tgcggagctt
1351 agctcgccca cgttctaata tt