Sequence of DPV Mesta yellow vein mosaic virus
Okra enation leaf curl virus [India:Munthal EL32:2006] segment DNA-A, complete sequence.
ACC No: GU112000
Dated: 2012-05-20 | Length: 2723 | CRC: -749710433
ID GU112000; SV 1; circular; genomic DNA; STD; VRL; 2723 BP. XX AC GU112000; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Okra enation leaf curl virus [India:Munthal EL32:2006] segment DNA-A, DE complete sequence. XX KW . XX OS Okra enation leaf curl virus [India:Munthal EL32:2006] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2723 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2723 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2723 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (26-SEP-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX FH Key Location/Qualifiers FH FT source 1. .2723 FT /organism="Okra enation leaf curl virus [India:Munthal FT EL32:2006]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="EL32" FT /mol_type="genomic DNA" FT /country="India:Munthal, Haryana" FT /isolation_source="leaf" FT /collected_by="M.Krishnareddy" FT /collection_date="2006" FT /db_xref="taxon:908126" FT gene 121. .486 FT /gene="AV2" FT CDS 121. .486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BNG1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BNG1" FT /protein_id="ADO40485.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDL FT ISIVRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVP FT EAQNVQDIQKSGCSKGM" FT gene 281. .1033 FT /gene="AV1" FT CDS 281. .1033 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BNG2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BNG2" FT /protein_id="ADO40486.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWA FT NRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLICRENIKTKNHTNSVMFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVK FT NDQRDRFQVLRRFQATVTGGQYACKEQVPIRKFYRVNNYVVYNHQEAGKYENHTENALL FT LYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1036. .1440) FT /gene="AC3" FT CDS complement(1036. .1440) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BNG3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BNG3" FT /protein_id="ADO40487.1" FT /translation="MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDI FT IKIRIQFNYNLRRALGVHKCFLTFRVWTTLHPQNGIFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSDIKFDLY" FT gene complement(1133. .1585) FT /gene="AC2" FT CDS complement(1133. .1585) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BNG4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BNG4" FT /protein_id="ADO40488.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN FT CFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQP FT SESSGSAQVFSDLPGLDDLTPSEWYFLKGIQNPSPQVSQQSRCNLN" FT gene complement(1482. .2570) FT /gene="AC1" FT CDS complement(1482. .2570) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BNG5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BNG5" FT /protein_id="ADO40489.1" FT /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQIKNFQTPTSKKYIKI FT CRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN FT LNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPHRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWAVKNAIFVTLEGPLY FT SGTNQSTAQGSEESAQEEESRS" FT gene complement(2114. .2416) FT /gene="AC4" FT CDS complement(2114. .2416) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BNG6" FT /protein_id="ADO40490.1" FT /translation="MGNLICTCSSSSRGNTSARISDSSTWSPQAGQHISIRTYRELNPA FT PTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS" XX SQ Sequence 2723 BP; 705 A; 576 C; 643 G; 799 T; 0 other; gu112000 Length: 2723 20-MAY-2012 Type: N Check: 304 .. 1 accggatggc cgcgcgattt tttttagtgg tgggtccaga acgcacgacg 51 atgcagactc aaagcttaga taacgctcct ttcgctataa gtacttgcgc 101 actaagtttc aaattgaaac atgtgggatc cattgttaaa cgagttccct 151 gagacggttc acgggtttcg ttgcatgctt gctattaaat atcttcaaca 201 actgtctgag gaatactctc ctgatacggt tgggtacgat ctaattcgcg 251 atctaatttc tattgtacgt tgtaggaatt atgtcgaagc gtcctgccga 301 tatcgtcatt tctacccccg cgtcgaaggt gcgtcgtcga ctgaacttcg 351 acagcccgta ttcaacccgt gcagttgccc ccactgtccg cgtcacaaaa 401 tcacgaatgt gggccaacag acccatgtac cggaagccca gaatgtacag 451 gatatacaga agtccggatg ttccaagggg atgtgaaggc ccatgtaagg 501 tgcagtcttt tgatgcgaag aacgatattg gtcacatggg taaggttatc 551 tgtctatctg atgttactag gggtattggg ctgacccatc gagtagggaa 601 acgtttttgc gtgaagtcat tgatttgcag ggagaacatc aagaccaaga 651 accatacgaa ttcggtgatg ttttggatcg tgagagacag gcgtcctaca 701 ggcaccccct acgatttcca gcaagtgttc aatgtttatg acaacgagcc 751 ttctacggct actgtaaaga acgaccagcg tgatcgattc caggttttga 801 ggaggtttca ggcgacagtt acaggaggac agtatgcttg taaggaacaa 851 gttccaatta ggaaattcta tcgtgttaac aattacgtgg tgtataatca 901 ccaggaagct gggaagtatg aaaatcacac tgagaatgct ttgttgttgt 951 atatggcatg tactcatgcc tctaaccctg tgtatgctac tttgaaagtt 1001 aggagttact tctacgattc tgtaacgaat taatattaat aaagatcgaa 1051 ttttatatct gaatattgat ccacatacat tgtttgttga attacattgt 1101 acaatacgtg ttctacagcc ttaattacta aattaattga gattacacct 1151 agattgttga gatacttgag gacttgggtt ttgaataccc ttaagaaaat 1201 accattctga gggtgtaagg tcgtccagac ccggaaggtc agaaaacact 1251 tgtgcactcc cagagctctc cgaaggttgt agttgaattg gatcctgatt 1301 tttattatgt ccatgttcgt cgtgaatgga cggtcgtcgt ggctgaggat 1351 cttgaaatag aggggatttg gaacctccca gataaagacg ccattccttg 1401 tatgagctgc agtgatgcgt tcccctgtgc gagaatccat ggttgaagca 1451 gttaatggat agataataag aacacccgca ttcaagatct actctcttcc 1501 tcctgtgcgc tctcttcgct tccctgtgct gtactttgat tggtacctga 1551 gtacaatggt ccttcaaggg tgacgaagat cgcatttttc actgcccagt 1601 tctttagtgc tgagttctta tcctcgtcta agaactcttt ataactgctg 1651 ttgggaccag gattgcagag gaagattgtt ggtatgccgc ctttaatttg 1701 aactggcttt ccgtactttg tgttggattg ccagtccctt tgggccccca 1751 tgaactcttt aaagtgtttg aggaagtggg gatctacgtc atcaatgacg 1801 ttataccagg cctcgttact gtagaccttt ggactaaggt ctagatgccc 1851 acacaaatag ttatgtggac ccagtgatct agcccacatc gtcttcccgg 1901 tacgactatc tccctcaatc actatacttt gtggtctatg tggccgcgca 1951 gcggcgtcga caacgttctc ggcagcccat tcctcaagtt cttccggaac 2001 ttgatcaaaa gaagaagaag aaaaaggaga aacataaacc tccacaggag 2051 gtgtaaaaat cctatctaaa ttagcattta aattatggaa ttgtaataca 2101 taatcttttg gagctaactc cttaatgact ctaagagcct ctgacttact 2151 gcctgcgtta agcgctgcgg cgtaagcgtc gttggctgtc tgttgtcccc 2201 ctctagcaga tcgtccgtcg atctgaaact ctccccactc gagagtgtcc 2251 ccgtccttgt cgatgtagga tttgacgtcg gagctggatt tagctccctg 2301 tatgttcgga tggaaatgtg ctgacctgct tggggagacc aggtcgaaga 2351 atcgctgatt ctggcacttg tatttcccct cgaactggat gagcacgtgc 2401 agatgaggtt ccccattttc atgaagttct ctgcagattt taatatattt 2451 ttttgaagtg ggggtttgga aattcttgat ttgggaaagt gcttcttctt 2501 tggtgagaga gcacttggga taagtgagga aataattttt ggagttaata 2551 aggaaacgct taggaggcat gttgactaag atagaggacc cgattgaccg 2601 ctcttgcaac tctcccctgt atatcgggtc tcaatatata gtgagaccca 2651 aatggcaaaa ttgtaattgt gggaataaat tcaaaatcct cacgctccaa 2701 aaagcggcca tccgtataat att