Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Tirupathi OY98:2005] segment DNA-A, complete sequence.
ACC No: GU112009
Dated: 2012-05-20 | Length: 2793 | CRC: 1437065524
ID GU112009; SV 1; circular; genomic DNA; STD; VRL; 2793 BP.
XX
AC GU112009;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Tirupathi OY98:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Tirupathi OY98:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2793
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2793
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2793
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (26-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2793
FT /organism="Bhendi yellow vein India virus [India:Tirupathi
FT OY98:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY98"
FT /mol_type="genomic DNA"
FT /country="India:Tirupathi, Andhra Pradesh"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2005"
FT /db_xref="taxon:908061"
FT gene 167. .532
FT /gene="AV2"
FT CDS 167. .532
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BNM0"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BNM0"
FT /protein_id="ADO40544.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 327. .1097
FT /gene="AV1"
FT CDS 327. .1097
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BNM1"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BNM1"
FT /protein_id="ADO40545.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKLVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENAFMLYMACTHASNPVYATLNIKIYLYDSVTN"
FT gene complement(675. .1031)
FT /gene="AC5"
FT CDS complement(675. .1031)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BNM2"
FT /protein_id="ADO40546.1"
FT /translation="MGTSHIKHERILRMILVFSCLLLVVNNIIVNPNKFLNQRLFLTRI
FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1100. .1504)
FT /gene="AC3"
FT CDS complement(1100. .1504)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BNM3"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BNM3"
FT /protein_id="ADO40547.1"
FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLLLRVFKTQVLKYLNNLGVVSINL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY"
FT gene complement(1197. .1649)
FT /gene="AC2"
FT CDS complement(1197. .1649)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BNM4"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BNM4"
FT /protein_id="ADO40548.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAQRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFVKGIQNSSPQISQQSRCSLN"
FT gene complement(1546. .2640)
FT /gene="AC1"
FT CDS complement(1546. .2640)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BNM5"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BNM5"
FT /protein_id="ADO40549.1"
FT /translation="MAAPNRFKINAKNYFLTYHKCSLTREEALSQLQNLQTPTNKKFIK
FT ICRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFH
FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD
FT SRTGKTMWARSLGPHNYSRGHIGISPKVYSNDEWFNIIDDVDPHYMKHFKEFMGAQRDW
FT QSNRTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEP
FT LYSGTNQSTAQGSAETHQEEESRS"
FT gene complement(2181. .2483)
FT /gene="AC4"
FT CDS complement(2181. .2483)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BNM6"
FT /protein_id="ADO40550.1"
FT /translation="MGNLIFTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA
FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS"
XX
SQ Sequence 2793 BP; 738 A; 559 C; 663 G; 833 T; 0 other;
gu112009 Length: 2793 20-MAY-2012 Type: N Check: 7538 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga actcgtgcga
51 tatttttcca gaactcgcgc gagtggtggg tccagaacgc acgactatgc
101 agactcaaag cttagataac gctccttcgg ctataagtac gtgcgcacta
151 agtttcagtt caaaaaatgt gggatccact attaaacgaa tttccggata
201 cggttcacgg gtttcgttgt atgctatctg taaaatattt gcaacttttg
251 tcgcaggatt attctccaga tacgcttggg tacgagttaa tacgggattt
301 aatttgtatt ttacgctccc gtaattatgt cgaagcgagc tgccgatatc
351 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag
401 cccatacacc agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac
451 aggcatggac aaacaggcct atgaacagga aacccagaat gtaccggatg
501 tacagaagtc cggatgttcc aaggggatgt gagggtccct gtaaggtaca
551 gtcgtttgaa tctcgacacg atatcgttca tattggtaag gtaatgtgta
601 tttcggatgt tacgcgtgga gtcggtttga cccatcgtat aggtaagcgt
651 ttttgtgtca agttagttta tgttttaggt aagatatgga tggacgagaa
701 catcaagacc aagaaccata cgaattcggt gatgtttttc cttgttcgtg
751 atcgaagacc gacagataaa ccacaagatt ttggtgaagt atttaatatg
801 tttgataacg agcccagtac ggcgaccgtg aagaacatgc atagggatcg
851 gtaccaggtg ttgaggaaat ggcatgcaac cgttactggt ggacaatatg
901 cgagtaagga acaggcgttg gttaagaaat ttgttagggt taacaattat
951 gttgtttaca accagcagga ggcaggaaaa tacgagaatc atacggagaa
1001 tgcgttcatg ctttatatgg cttgtaccca tgctagcaac ccagtttatg
1051 ctacgctgaa cattaagata tatctttatg actctgtaac gaattgaaat
1101 taataaagat tgaattttat atctgaatat tggtctacat acattgtttg
1151 attaattaca ttgtacaaga catgttcgac agctttgata actaaattaa
1201 ttgagactac accgagattg ttgagatatt tgaggacttg agttttgaat
1251 acccttaaca aaagaccagt cggagggtgt aaggtcgtcc agattcggaa
1301 ggttagaaaa cacttgtgta ttcccagagc tttccgtagg ttgtagttga
1351 aatggatcct gagtgttatt atgtccatgt tcgtcgtgaa tggacggttg
1401 tcgtggttga ggatcttgaa atagagggga tttggaacct tccagatata
1451 gacgccattc tttgcttgag ctgcagtgat gcgtgcccct gtgcgagaat
1501 ccatggttgt ggcagttgat agagagataa taagaacacc cgcattcaag
1551 atctactctc ctcctcctga tgcgtctctg cgcttccctg tgctgtactt
1601 tgattggtac ccgagtacaa cggttcggtg agaaagacga atgctgcatt
1651 ttttaaagcc cacgctttca aagctgagtt cttttcctcg tccaagaatt
1701 ctttatagct tgcgttgggg cctggattgc agaggaagat tgttggaata
1751 ccgcctttaa tttgaaccgg cttcccgtac tttgtgcgat ttgattgcca
1801 gtccctttgg gcccccatga attccttaaa gtgtttcata taatgcgggt
1851 caacatcgtc tataatgttg aaccactcat cgtttgaata cactttaggg
1901 cttataccta tgtgacctct cgaatagtta tgtgggccta atgacctagc
1951 ccacatagtt ttgcccgtac gactatctcc ctctaagact aaactcaaag
2001 gtctcagagg ccgcgcagcg gcgtccatga cgttttccga tacccattcc
2051 tcaagttctt ctggaacttg atcgaaagaa gaagataaaa aaggagaaac
2101 gtaaacctcc aagggaggtg taaaaatcct atctaaattg gcatttaaat
2151 tatgaaattg taagacataa tccttaggtg ctaactccct aatgactcta
2201 agagcctctg acttactgcc tgcgttaagt gctgcggcgt aagcgtcgtt
2251 ggctgtctgc tgtccccctc ttgcagatcg tccatcgatc tgaaactctc
2301 cccattcgag ggtgtctccg tccttgtcga tgtaggactt gacatctgag
2351 cttgatttag ctccctgaat gttcggatgg aaatgtactg acctgcttgg
2401 ggagaccagg tcgaagaatc gctgattctg gcacttgtat ttgccctcga
2451 actggatgag cacgtgaaga tgaggttccc catcctcgtg aagctctctg
2501 cagattttga tgaatttttt atttgttggg gtttgtaggt tttggagttg
2551 ggaaagtgct tcctctctag taagagagca tttgtgataa gtgagaaaat
2601 aatttttggc atttatttta aaccgattgg gtgctgccat gttgacttag
2651 tcaatcggtg tctctcaact ctctctatgt atcggtgtat tggagtccta
2701 tatatatgga gactctaatg gcataaatgt aaataaaaga actttaattt
2751 gaaattcaaa ggaaaaggct aaagcggcca tccgtctaat att