Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Tirupathi OY98:2005] segment DNA-A, complete sequence.
ACC No: GU112009
Dated: 2012-05-20 | Length: 2793 | CRC: 1437065524
ID GU112009; SV 1; circular; genomic DNA; STD; VRL; 2793 BP. XX AC GU112009; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Bhendi yellow vein India virus [India:Tirupathi OY98:2005] segment DNA-A, DE complete sequence. XX KW . XX OS Bhendi yellow vein India virus [India:Tirupathi OY98:2005] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2793 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2793 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2793 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (26-SEP-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX FH Key Location/Qualifiers FH FT source 1. .2793 FT /organism="Bhendi yellow vein India virus [India:Tirupathi FT OY98:2005]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY98" FT /mol_type="genomic DNA" FT /country="India:Tirupathi, Andhra Pradesh" FT /isolation_source="leaf" FT /collected_by="M.Krishnareddy" FT /collection_date="2005" FT /db_xref="taxon:908061" FT gene 167. .532 FT /gene="AV2" FT CDS 167. .532 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BNM0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BNM0" FT /protein_id="ADO40544.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 327. .1097 FT /gene="AV1" FT CDS 327. .1097 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BNM1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BNM1" FT /protein_id="ADO40545.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKLVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENAFMLYMACTHASNPVYATLNIKIYLYDSVTN" FT gene complement(675. .1031) FT /gene="AC5" FT CDS complement(675. .1031) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:E7BNM2" FT /protein_id="ADO40546.1" FT /translation="MGTSHIKHERILRMILVFSCLLLVVNNIIVNPNKFLNQRLFLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1100. .1504) FT /gene="AC3" FT CDS complement(1100. .1504) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BNM3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BNM3" FT /protein_id="ADO40547.1" FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLLLRVFKTQVLKYLNNLGVVSINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1197. .1649) FT /gene="AC2" FT CDS complement(1197. .1649) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BNM4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BNM4" FT /protein_id="ADO40548.1" FT /translation="MQHSSFSPNRCTRVPIKVQHREAQRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP FT TESSGNTQVFSNLPNLDDLTPSDWSFVKGIQNSSPQISQQSRCSLN" FT gene complement(1546. .2640) FT /gene="AC1" FT CDS complement(1546. .2640) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BNM5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BNM5" FT /protein_id="ADO40549.1" FT /translation="MAAPNRFKINAKNYFLTYHKCSLTREEALSQLQNLQTPTNKKFIK FT ICRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFH FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD FT SRTGKTMWARSLGPHNYSRGHIGISPKVYSNDEWFNIIDDVDPHYMKHFKEFMGAQRDW FT QSNRTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEP FT LYSGTNQSTAQGSAETHQEEESRS" FT gene complement(2181. .2483) FT /gene="AC4" FT CDS complement(2181. .2483) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BNM6" FT /protein_id="ADO40550.1" FT /translation="MGNLIFTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2793 BP; 738 A; 559 C; 663 G; 833 T; 0 other; gu112009 Length: 2793 20-MAY-2012 Type: N Check: 7538 .. 1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga actcgtgcga 51 tatttttcca gaactcgcgc gagtggtggg tccagaacgc acgactatgc 101 agactcaaag cttagataac gctccttcgg ctataagtac gtgcgcacta 151 agtttcagtt caaaaaatgt gggatccact attaaacgaa tttccggata 201 cggttcacgg gtttcgttgt atgctatctg taaaatattt gcaacttttg 251 tcgcaggatt attctccaga tacgcttggg tacgagttaa tacgggattt 301 aatttgtatt ttacgctccc gtaattatgt cgaagcgagc tgccgatatc 351 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtctga acttcggcag 401 cccatacacc agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac 451 aggcatggac aaacaggcct atgaacagga aacccagaat gtaccggatg 501 tacagaagtc cggatgttcc aaggggatgt gagggtccct gtaaggtaca 551 gtcgtttgaa tctcgacacg atatcgttca tattggtaag gtaatgtgta 601 tttcggatgt tacgcgtgga gtcggtttga cccatcgtat aggtaagcgt 651 ttttgtgtca agttagttta tgttttaggt aagatatgga tggacgagaa 701 catcaagacc aagaaccata cgaattcggt gatgtttttc cttgttcgtg 751 atcgaagacc gacagataaa ccacaagatt ttggtgaagt atttaatatg 801 tttgataacg agcccagtac ggcgaccgtg aagaacatgc atagggatcg 851 gtaccaggtg ttgaggaaat ggcatgcaac cgttactggt ggacaatatg 901 cgagtaagga acaggcgttg gttaagaaat ttgttagggt taacaattat 951 gttgtttaca accagcagga ggcaggaaaa tacgagaatc atacggagaa 1001 tgcgttcatg ctttatatgg cttgtaccca tgctagcaac ccagtttatg 1051 ctacgctgaa cattaagata tatctttatg actctgtaac gaattgaaat 1101 taataaagat tgaattttat atctgaatat tggtctacat acattgtttg 1151 attaattaca ttgtacaaga catgttcgac agctttgata actaaattaa 1201 ttgagactac accgagattg ttgagatatt tgaggacttg agttttgaat 1251 acccttaaca aaagaccagt cggagggtgt aaggtcgtcc agattcggaa 1301 ggttagaaaa cacttgtgta ttcccagagc tttccgtagg ttgtagttga 1351 aatggatcct gagtgttatt atgtccatgt tcgtcgtgaa tggacggttg 1401 tcgtggttga ggatcttgaa atagagggga tttggaacct tccagatata 1451 gacgccattc tttgcttgag ctgcagtgat gcgtgcccct gtgcgagaat 1501 ccatggttgt ggcagttgat agagagataa taagaacacc cgcattcaag 1551 atctactctc ctcctcctga tgcgtctctg cgcttccctg tgctgtactt 1601 tgattggtac ccgagtacaa cggttcggtg agaaagacga atgctgcatt 1651 ttttaaagcc cacgctttca aagctgagtt cttttcctcg tccaagaatt 1701 ctttatagct tgcgttgggg cctggattgc agaggaagat tgttggaata 1751 ccgcctttaa tttgaaccgg cttcccgtac tttgtgcgat ttgattgcca 1801 gtccctttgg gcccccatga attccttaaa gtgtttcata taatgcgggt 1851 caacatcgtc tataatgttg aaccactcat cgtttgaata cactttaggg 1901 cttataccta tgtgacctct cgaatagtta tgtgggccta atgacctagc 1951 ccacatagtt ttgcccgtac gactatctcc ctctaagact aaactcaaag 2001 gtctcagagg ccgcgcagcg gcgtccatga cgttttccga tacccattcc 2051 tcaagttctt ctggaacttg atcgaaagaa gaagataaaa aaggagaaac 2101 gtaaacctcc aagggaggtg taaaaatcct atctaaattg gcatttaaat 2151 tatgaaattg taagacataa tccttaggtg ctaactccct aatgactcta 2201 agagcctctg acttactgcc tgcgttaagt gctgcggcgt aagcgtcgtt 2251 ggctgtctgc tgtccccctc ttgcagatcg tccatcgatc tgaaactctc 2301 cccattcgag ggtgtctccg tccttgtcga tgtaggactt gacatctgag 2351 cttgatttag ctccctgaat gttcggatgg aaatgtactg acctgcttgg 2401 ggagaccagg tcgaagaatc gctgattctg gcacttgtat ttgccctcga 2451 actggatgag cacgtgaaga tgaggttccc catcctcgtg aagctctctg 2501 cagattttga tgaatttttt atttgttggg gtttgtaggt tttggagttg 2551 ggaaagtgct tcctctctag taagagagca tttgtgataa gtgagaaaat 2601 aatttttggc atttatttta aaccgattgg gtgctgccat gttgacttag 2651 tcaatcggtg tctctcaact ctctctatgt atcggtgtat tggagtccta 2701 tatatatgga gactctaatg gcataaatgt aaataaaaga actttaattt 2751 gaaattcaaa ggaaaaggct aaagcggcca tccgtctaat att