Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Jalgov OY126:2006] segment DNA-A, complete sequence.
ACC No: GU112026
Dated: 2012-05-20 | Length: 2741 | CRC: 36013153
ID GU112026; SV 1; circular; genomic DNA; STD; VRL; 2741 BP.
XX
AC GU112026;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Jalgov OY126:2006] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Jalgov OY126:2006]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2741
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2741
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2741
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (29-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2741
FT /organism="Bhendi yellow vein India virus [India:Jalgov
FT OY126:2006]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY126"
FT /mol_type="genomic DNA"
FT /country="India:Jalgov, Maharashtra"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2006"
FT /db_xref="taxon:908034"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BNY8"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BNY8"
FT /protein_id="ADO40662.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICIFRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BNY9"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BNY9"
FT /protein_id="ADO40663.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BNZ0"
FT /protein_id="ADO40664.1"
FT /translation="MGTSHIKHQCILGVILVFSCFLLVVNNVVVNPNKLLDQSLLLTRI
FT LSTSNGCMPFPQHLVSIPMHVLHGRRTRLVIKHIKYFTKILWFIYRSSITNKEKHHRIR
FT MVLGLDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BNZ1"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BNZ1"
FT /protein_id="ADO40665.1"
FT /translation="MDSRTGERITAAHSTNGVFIWEVPNPLYFKILSHDNRPFTTNMDI
FT ITMRIQFNYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKHLNNLGVISINL
FT VIKAVEHVLYNVINQTMYVDQYSDIQFKLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BNZ2"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BNZ2"
FT /protein_id="ADO40666.1"
FT /translation="MQHSSFSPNRSTPVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSFNEWRLYLGGSKSPLFQNPQPRQPSIHDEHGHHNNEDPIQLQP
FT SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQTSQQSRCNLN"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BNZ3"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BNZ3"
FT /protein_id="ADO40667.1"
FT /translation="MAPSNRFQINSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIK
FT ICRELHEDGEPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDILDHGVFQVDGRSARGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFH
FT NLNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFVFLTQPL
FT YSGTNQSSTQGSEESAQEETSGP"
FT gene complement(2141. .2434)
FT /gene="AC4"
FT CDS complement(2141. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BNZ4"
FT /protein_id="ADO40668.1"
FT /translation="MGNLIFTCSSSSKESSSAGTIDSSTSPPQLGQHISIRTFRELKAQ
FT AMSKPTWRKTETSLIMEFSKSMEDQLEEVAKLPTTHMPRQSTQGPKLRPSIY"
XX
SQ Sequence 2741 BP; 716 A; 544 C; 663 G; 818 T; 0 other;
gu112026 Length: 2741 20-MAY-2012 Type: N Check: 1464 ..
1 accggatggc cgcgcgattc ttttaattgg tgggtccaga acgcacggct
51 atgcagactc agagcttaga taacgctcct ttggctataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactattaaa cgaatttccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacgct tgggtacgag ttaatacggg
251 atttaatttg tattttccgc tcccgtaatt atgtcgaagc gagctgcaga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatatcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt
701 cgtgatcgac gaccggtaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aacgagccta gtacggcgac cgtgaagaac atgcataggg
801 atcgatacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa
851 tatgcgagta aggagcaggc tttggtcaag aagtttgtta gggttaacaa
901 ctacgttgtt tacaaccagc aggaagcagg aaaatacgag aatcacaccg
951 agaatgcatt gatgctttat atggcttgta cccatgctag caatcctgtt
1001 tatgctactc ttaagattag aatatatttt tatgactctg taacgaacta
1051 atattaataa agtttaaatt gtatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aatacatgtt caacggcttt aataactaaa
1151 ttaattgaga ttacacctag attgttgaga tgtttgagga cttgggtttt
1201 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgcactccca gagctttccg aaggttgtag
1301 ttgaattgga tcctcattgt tatgatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ctgaggattt tgaaataaag gggatttgga acctcccaga
1401 taaagacgcc attcgttgaa tgagctgcag tgatgcgttc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatacttag gtaatagctg catccacact
1501 caaggtccac tcgtttcctc ctgtgcgctc tcttcgcttc cctgtgttga
1551 actttgattg gtaccggagt agagcggttg ggtgagaaag acgaatgttg
1601 cattctttaa agcccaggat tttaatgctg agttcttatc ctcgtctaag
1651 aactctttat agcttgcatt gggccctgga ttgcagagga agattgttgg
1701 tatgccgcct ttaatttgaa ctggcttccc gtactttgtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgttttag gaagtgtgga
1801 tcgacgtcat caatgacgtt ataccaagcg tcgttactgt acacctttgg
1851 gctaaggtcc agatgcccgc ataaatagtt atgtgggcct aaagacctag
1901 cccacattgt ttttccagta cgactatctc cctcaattac tatactttga
1951 ggtctcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc
2001 ttcaagttct tctggaactt gatcaaatga agaagaagaa aaaggagaaa
2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa
2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt
2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt
2201 tggcagtttg gcaacctcct ctagctgatc ttccatcgac ttggaaaact
2251 ccatgatcaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct
2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgttcc tgcactggaa ctttccttcg
2401 aactggatga gcacgtgaag atgaggttcc ccatcctcgt gaagctctct
2451 gcagatcttg atgaattttt tgtttgttgg ggtttgtagg ttttggagtt
2501 gggaaagtgc ttcctcttta gtcagagagc atttgggata agtgaggaaa
2551 taatttttgg aatttatttg aaaccgattg gaaggcgcca tgacgactaa
2601 tgaaaaccga gtgactcgcc tcgctcactc tctctgggat atggataccc
2651 aataaattgg gagcaccaaa gggcaaatgg gtaattttgt aacgtaattc
2701 tgaatctcca cgctccagaa agcggccatc catacaatat t