Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Pandarahalli:OY170:2006] segment DNA-A, complete sequence.
ACC No: GU112036
Dated: 2012-05-20 | Length: 2745 | CRC: -1890638906
ID GU112036; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC GU112036; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Bhendi yellow vein India virus [India:Pandarahalli:OY170:2006] segment DE DNA-A, complete sequence. XX KW . XX OS Bhendi yellow vein India virus [India:Pandarahalli:OY170:2006] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2745 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2745 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2745 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (30-SEP-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX FH Key Location/Qualifiers FH FT source 1. .2745 FT /organism="Bhendi yellow vein India virus FT [India:Pandarahalli:OY170:2006]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY170" FT /mol_type="genomic DNA" FT /country="India:Pandarahalli, Tamil Nadu" FT /isolation_source="leaf" FT /collected_by="V.Venkataravanappa" FT /collection_date="2006" FT /db_xref="taxon:908045" FT gene 121. .486 FT /gene="AV2" FT CDS 121. .486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BP57" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BP57" FT /protein_id="ADO40731.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASEFRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281. .1051 FT /gene="AV1" FT CDS 281. .1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BP58" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BP58" FT /protein_id="ADO40732.1" FT /translation="MWKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVDHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629. .985) FT /gene="AC5" FT CDS complement(629. .985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:E7BP59" FT /protein_id="ADO40733.1" FT /translation="MGTSHIKHQRILRMILVFSCLLLVVNNIIVNPNKFLNQRLFLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1054. .1458) FT /gene="AC3" FT CDS complement(1054. .1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BP60" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BP60" FT /protein_id="ADO40734.1" FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVVSINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1151. .1603) FT /gene="AC2" FT CDS complement(1151. .1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BP61" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BP61" FT /protein_id="ADO40735.1" FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSFN" FT gene complement(1500. .2588) FT /gene="AC1" FT CDS complement(1500. .2588) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BP62" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BP62" FT /protein_id="ADO40736.1" FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQFLNLQTPVNKKFIRI FT CRELHEDGNPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYME FT KDGDILNHGVFQVDGRSATGGCQTANDAYAEAINAGSKAQALNILKEKAPRDFLLQFHN FT LNSNLDRYFQEPPAPYVSPFSSSSFDQVPEELEEWACENVVDAAARPLRPQSIVIEEDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYEKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY FT SGTNQSTAQGSEETHQEEESRS" FT gene complement(2141. .2434) FT /gene="AC4" FT CDS complement(2141. .2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BP63" FT /protein_id="ADO40737.1" FT /translation="MGILTCMFSSSSKESSSAGTIDSSTSPPQLGQHISIRTFRELKAQ FT AMSKPTWRKTETSLIMEFSKSMDDQLQEVAKLPTTHMPRQSTQGPKLRPSIY" XX SQ Sequence 2745 BP; 740 A; 525 C; 660 G; 820 T; 0 other; gu112036 Length: 2745 20-MAY-2012 Type: N Check: 5818 .. 1 accggatggc cgcgcgattc tttcaagtgg tgggtccaga acgcacgacg 51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacgtgcgc 101 actaagtttc aattcaaaaa atgtgggatc cactattaaa tgaatttccg 151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact 201 tttgtcgcag gattattctc cagatacact tgggtacgag ttaatacggg 251 atttaatttg tattttacgc tcccgtaatt atgtggaagc gagctgccga 301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaatttcg 351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa 401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg 451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg 501 tacagtcgtt tgaatctcga cacgatgtcg atcatattgg taaggtaatg 551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg 651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt 701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa 751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg 801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa 851 tatgcgagta aggaacaggc gttggttaag aaatttgtta gggttaacaa 901 ttatgttgtt tacaaccagc aggaggcagg aaaatacgag aatcatacgg 951 agaatgcgtt gatgctttat atggcttgta cccatgctag caacccagtt 1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg 1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg 1101 tttgattaat tacattgtac aaaacatgtt cgacagcttt aataactaaa 1151 ttaattgaaa ctacaccgag attgttgaga tatttgagga cttgggtttt 1201 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc 1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggttgtag 1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg 1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga 1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga 1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt 1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt 1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg 1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag 1651 aattctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg 1701 tatgccgcct ttaatttgaa ctggcttctc gtactttgtg tttgattgcc 1751 agtccctttg ggcccccatg aattctttaa agtgttttag gaagtgtgga 1801 tcgacgtcat caatgacgtt ataccaagcg tcgttactgt acacctttgg 1851 gctaaggtcc agatgcccgc ataaatagtt atgtgggcct aaagacctag 1901 cccacattgt ttttccagta cgactatctt cctcaattac tatactctga 1951 ggtctcaggg gccgcgcagc ggcatcgaca acgttctcgc acgcccactc 2001 ttcaagttct tctggaactt gatcaaatga agaagatgaa aaaggagaaa 2051 cataaggagc tggaggctcc tgaaaatatc tatctaaatt agaatttaaa 2101 ttatgaaatt gaagtagaaa gtctcttggg gctttctcct tcagtatatt 2151 gagggcctga gctttggacc ctgcgttgat tgcctcggca tatgcgtcgt 2201 tggcagtttg gcaacctcct gtagctgatc gtccatcgac ttggaaaact 2251 ccatgattaa ggatgtctcc gtctttctcc atgtaggttt tgacatcgct 2301 tgagctttta gctccctgaa tgttcggatg gaaatgtgct gacctagttg 2351 gggaggtgag gtcgaagaat ctattgttcc tgcactggaa ctttccttcg 2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct 2451 gcagattcta atgaattttt tgtttactgg ggtttggaga tttaagaatt 2501 gggaaagtgc ttcttcttta gtcagggagc acttgggata agtaaggaaa 2551 taatttttgg aatatatttg aaagcgttta gaaggcatgt tgactaaaat 2601 tgagtaccga ttgactcgct ctggcaactc tctctggtat atcggtaccc 2651 aatatatagt gagtaccaaa tggcataaat gtaaataaaa gaactttaat 2701 ttgaaattca aaggaaaagg ctaaagcggc catccgtcta atatt