Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus [India:Raichur:OY54B:2005] segment DNA-A, complete sequence.
ACC No: GU112068
Dated: 2012-05-20 | Length: 2742 | CRC: -1448564416
ID GU112068; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC GU112068; XX DT 02-JAN-2011 (Rel. 107, Created) DT 20-MAY-2012 (Rel. 112, Last updated, Version 2) XX DE Bhendi yellow vein mosaic virus [India:Raichur:OY54B:2005] segment DNA-A, DE complete sequence. XX KW . XX OS Bhendi yellow vein mosaic virus [India:Raichur:OY54B:2005] OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RX PUBMED; 22447131. RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S., RA Krishna Reddy M.; RT "Molecular characterization of distinct bipartite begomovirus infecting RT bhendi (Abelmoschus esculentus L.) in India"; RL Virus Genes 44(3):522-535(2012). XX RN [2] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT "Molecular genetic diversity of begomoviruses infecting okra in India"; RL Unpublished. XX RN [3] RP 1-2742 RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P., RA Jalali S., Krishnareddy M.; RT ; RL Submitted (01-OCT-2009) to the INSDC. RL Division of Plant Pathology, Indian Institute of Horticultural Research, RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India XX FH Key Location/Qualifiers FH FT source 1. .2742 FT /organism="Bhendi yellow vein mosaic virus FT [India:Raichur:OY54B:2005]" FT /segment="DNA-A" FT /host="Abelmoschus esculentus (okra)" FT /isolate="OY54B" FT /mol_type="genomic DNA" FT /country="India:Raichur, Karnataka" FT /isolation_source="leaf" FT /collected_by="V.Venkataravanappa" FT /collection_date="2005" FT /db_xref="taxon:908107" FT gene 121. .486 FT /gene="AV2" FT CDS 121. .486 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7BPT0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7BPT0" FT /protein_id="ADO40954.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT ETQNVPDVQKSGCSKGM" FT gene 281. .1051 FT /gene="AV1" FT CDS 281. .1051 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7BPT1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7BPT1" FT /protein_id="ADO40955.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(629. .985) FT /gene="AC5" FT CDS complement(629. .985) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:E7BPT2" FT /protein_id="ADO40956.1" FT /translation="MGTSHIKHQRILRMILIFSCLLLVVNNIIVNPNKFLNQRLFLTRI FT LSTSNGCMPFPQHLVPIPMHVLHGRRTGLVIKHIKYFTKILWFICRSSITNKEKHHRIR FT MVLGLDVLVHPYLT" FT gene complement(1054. .1458) FT /gene="AC3" FT CDS complement(1054. .1458) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BPT3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BPT3" FT /protein_id="ADO40957.1" FT /translation="MDSRTGARITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI FT ITLRIHFNYHLRKALGIHKCFLTFRIWTTLHPQTGLFLRVFKTQVLKYLNNLGVVSINL FT VIKAVEHVLYNVINQTMYVDQYSDIKFNLY" FT gene complement(1151. .1603) FT /gene="AC2" FT CDS complement(1151. .1603) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7BPT4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7BPT4" FT /protein_id="ADO40958.1" FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLPP FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCSLN" FT gene complement(1500. .2588) FT /gene="AC1" FT CDS complement(1500. .2588) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /db_xref="GOA:E7BPT5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7BPT5" FT /protein_id="ADO40959.1" FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQLQNLQTPTNKKFIKI FT CRELHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFHN FT LNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGDS FT RTGKTMWARSLGPHNFLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPLY FT SGTNQSTTQGSEETHQEEESRS" FT gene complement(2132. .2434) FT /gene="AC4" FT CDS complement(2132. .2434) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BPT6" FT /protein_id="ADO40960.1" FT /translation="MGNLIFTCSSSSRANTSARISDSSTWSPQAGQYISIRTFRELNQA FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSRQPTTLTPQHLTQAVSQRLLESLGS" XX SQ Sequence 2742 BP; 731 A; 543 C; 654 G; 814 T; 0 other; gu112068 Length: 2742 20-MAY-2012 Type: N Check: 4138 .. 1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgact 51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacgtgcgc 101 actaagtttc aattcaaaaa atgtgggatc cactattaaa tgaatttccg 151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact 201 tttgtcgcag gattattctc cagatacgct tgggtacgag ttaatacggg 251 atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga 301 tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg 351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa 401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg 451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg 501 tacagtcgtt tgaatctcga cacgatatcg ttcatattgg taaggtaatg 551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc gtataggtaa 601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg 651 agaacatcaa gaccaagaac catacgaatt cggtgatgtt tttccttgtt 701 cgtgatcgac gaccgacaga taaaccacaa gattttggtg aagtatttaa 751 tatgtttgat aacgagccca gtacggcgac cgtgaagaac atgcataggg 801 atcggtacca ggtgttgagg aaatggcatg caaccgttac tggtggacaa 851 tatgcgagta aggaacaggc gttggttaag aaatttgtta gggttaacaa 901 ttatgttgtt tacaaccagc aggaggcagg aaaatatgag aatcatacgg 951 agaatgcgtt gatgctttat atggcttgta cccatgctag caacccagtt 1001 tatgctacgc tgaagattag gatatatttt tatgactctg taacgaattg 1051 aaattaataa agattgaatt ttatatctga atattggtct acatacattg 1101 tttgattaat tacattgtac aagacatgtt cgacggcttt aataactaag 1151 ttaattgaga ctacaccgag attgttgaga tatttgagga cttgggtttt 1201 gaataccctt aagaaaagac cagtctgagg gtgtaaggtc gtccagattc 1251 ggaaggttag aaaacacttg tgtattccca gagctttccg taggtggtag 1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg 1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga 1401 tatagacgcc attctttgct tgagctgcag tgatgcgtgc ccctgtgcga 1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt 1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgttgt 1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg 1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag 1651 aattctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg 1701 aatgccgcct ttaatttgaa ccggcttccc gtatttggtg tttgattgcc 1751 agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg 1801 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg 1851 gcttagatct aggtgaccac acaaaaagtt atgtgggcct agtgacctag 1901 cccacatagt tttgcccgta cgactatctc cctctaagac taaactcaaa 1951 ggtctcagag gccgcgcagc ggcgtccatg acgttttccg atacccattc 2001 ctcaagttct tctggaactt gatcgaaaga agaagataaa aaaggagaaa 2051 cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa 2101 ttatgaaatt gtaagacata atccttaggt gctaactccc taatgactct 2151 aagagcctct gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt 2201 tggctgtctg ctgtccccct cttgcagatc gtccatcgat ctgaaactct 2251 ccccattcga gggtgtctcc gtccttgtcg atgtaggact tgacatctga 2301 gcttgattta gctccctgaa tgttcggatg gaaatgtact gacctgcttg 2351 gggagaccag gtcgaagaat cgctgattct ggcacttgta tttgccctcg 2401 aactggatga gcacgtgaag atgaggttcc ccatcctcgt gaagctctct 2451 gcagatcttg atgaattttt tatttgttgg ggtttgtagg ttttggagtt 2501 gggaaagtgc ttcctcttta gtaagagagc attttggata agtaaggaaa 2551 taatttttgg aatatatttg aaagcgttta gaaggcatgt tgactaaaat 2601 tgagtacccg attgactcgc tctggcaact ctctctggta tatcggtacc 2651 caatatatag tgagtaccaa atggcatatg tgtaattttg taatgaaatt 2701 caaaatcctc acgctccaaa aagcggccat ccgtataata tt