Sequence of DPV Potato virus X

Potato virus X isolate Sam-21-PVX coat protein (cp) gene, complete cds.

ACC No: GU144348

Dated: 2010-09-07 | Length: 928 | CRC: 336191519

                
ID   GU144348; SV 1; linear; genomic RNA; STD; VRL; 928 BP.
XX
AC   GU144348;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate Sam-21-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-928
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-928
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .928
FT                   /organism="Potato virus X"
FT                   /host="potato, Kennebec cultivar"
FT                   /isolate="Sam-21-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Scotland"
FT                   /db_xref="taxon:12183"
FT   gene            150. .863
FT                   /gene="cp"
FT   CDS             150. .863
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q77LU0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q77LU0"
FT                   /protein_id="ADA57748.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 928 BP; 260 A; 250 C; 212 G; 206 T; 0 other;

gu144348 Length: 928  07-SEP-2010  Type: N  Check: 406  ..

       1  ttgggtgagg actgaacctt gtgtcatcaa gattactgga gaatcaatca
      51  cagtgttggc ttgcaaatta gattcagaaa ccatcagagc cattgccgat
     101  ctcaagccac tctccgttga acggttaagt ttccattgat actcgaaaga
     151  tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact
     201  accacaaaaa ctgcaggcgc aactcctgcc acagcttcag gactgtttac
     251  catcccggat ggggatttct tcagtacagc ccgtgctata gtagccagca
     301  atgccgttgc aacaaatgag gaccttagca agattgaggc catctggaag
     351  gacatgaagg tgcccacaga cactatggca caggctgctt gggacttagt
     401  cagacactgc gctgatgtgg gctcatccgc tcaaacagaa atgatagata
     451  caggccccta ttccaacggc atcagcagag ccagactggc agcagcaatt
     501  aaagaggtgt gcacacttag gcaattttgc atgaagtatg ccccagtggt
     551  atggaactgg atgctgacta acaacagtcc acccgctaac tggcaagcac
     601  aaggttttaa gcctgagcac aaattcgctg cattcgactt cttcaatgga
     651  gtcaccaacc cagctgccat catgcccaaa gaggggctca tccggccacc
     701  gtctgaagct gaaatgaatg ctgcccaaac tgctgccttt gtgaagatta
     751  cgaaggccag ggcacaatcc aacgactttg ccagcctaga tgcagctgtc
     801  actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct
     851  cccaccacca taactacgtc tacataaccg acgcctaccc cagtttcata
     901  gtattttctg gtttgattgt atgaatgg