Sequence of DPV Potato virus X
Potato virus X isolate Sam-21-PVX coat protein (cp) gene, complete cds.
ACC No: GU144348
Dated: 2010-09-07 | Length: 928 | CRC: 336191519
ID GU144348; SV 1; linear; genomic RNA; STD; VRL; 928 BP. XX AC GU144348; XX DT 23-DEC-2009 (Rel. 103, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Potato virus X isolate Sam-21-PVX coat protein (cp) gene, complete cds. XX KW . XX OS Potato virus X OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; OC Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-928 RA Mortensen R.J., Shen X., Reid A., Mulholland V.; RT "Characterization of Viruses Infecting Potato Plants from a Single Location RT in Shetland, an Isolated Scottish Archipelago"; RL J. Phytopathol. 158(9):633-640(2010). XX RN [2] RP 1-928 RA Mortensen R.J., Shen X., Reid A., Mulholland V.; RT ; RL Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases. RL Diagnostics and Molecular Biology Section, SASA (Science and Advice for RL Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK XX FH Key Location/Qualifiers FH FT source 1. .928 FT /organism="Potato virus X" FT /host="potato, Kennebec cultivar" FT /isolate="Sam-21-PVX" FT /mol_type="genomic RNA" FT /country="United Kingdom:Scotland" FT /db_xref="taxon:12183" FT gene 150. .863 FT /gene="cp" FT CDS 150. .863 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:Q77LU0" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q77LU0" FT /protein_id="ADA57748.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLSKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 928 BP; 260 A; 250 C; 212 G; 206 T; 0 other; gu144348 Length: 928 07-SEP-2010 Type: N Check: 406 .. 1 ttgggtgagg actgaacctt gtgtcatcaa gattactgga gaatcaatca 51 cagtgttggc ttgcaaatta gattcagaaa ccatcagagc cattgccgat 101 ctcaagccac tctccgttga acggttaagt ttccattgat actcgaaaga 151 tgtcagcacc agctagcaca acacaggcca cagggtcaac tacctcaact 201 accacaaaaa ctgcaggcgc aactcctgcc acagcttcag gactgtttac 251 catcccggat ggggatttct tcagtacagc ccgtgctata gtagccagca 301 atgccgttgc aacaaatgag gaccttagca agattgaggc catctggaag 351 gacatgaagg tgcccacaga cactatggca caggctgctt gggacttagt 401 cagacactgc gctgatgtgg gctcatccgc tcaaacagaa atgatagata 451 caggccccta ttccaacggc atcagcagag ccagactggc agcagcaatt 501 aaagaggtgt gcacacttag gcaattttgc atgaagtatg ccccagtggt 551 atggaactgg atgctgacta acaacagtcc acccgctaac tggcaagcac 601 aaggttttaa gcctgagcac aaattcgctg cattcgactt cttcaatgga 651 gtcaccaacc cagctgccat catgcccaaa gaggggctca tccggccacc 701 gtctgaagct gaaatgaatg ctgcccaaac tgctgccttt gtgaagatta 751 cgaaggccag ggcacaatcc aacgactttg ccagcctaga tgcagctgtc 801 actcgaggtc gtatcactgg aacaacaacc gctgaggctg ttgtcactct 851 cccaccacca taactacgtc tacataaccg acgcctaccc cagtttcata 901 gtattttctg gtttgattgt atgaatgg