Sequence of DPV Tomato yellow mosaic virus
Tomato yellow mosaic virus clone AN152 replication-associated protein gene, complete cds.
ACC No: GU320571
Dated: 2010-06-02 | Length: 1367 | CRC: -2089455918
ID GU320571; SV 1; linear; genomic DNA; STD; VRL; 1367 BP. XX AC GU320571; XX DT 02-JUN-2010 (Rel. 105, Created) DT 02-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Tomato yellow mosaic virus clone AN152 replication-associated protein gene, DE complete cds. XX KW . XX OS Tomato yellow mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-1367 RA McLaughlin P.D., Roye M.E., Amarakoon I., McLaughlin W.A., Maxwell D.; RT "Detection of Begomoviruses Associated with Crops and Weeds in Caribbean RT Islands of Antigua, Barbados and St Kitts & Nevis"; RL Unpublished. XX RN [2] RP 1-1367 RA McLaughlin P.D., Roye M.E., Amarakoon I., McLaughlin W.A., Maxwell D.; RT ; RL Submitted (11-DEC-2009) to the EMBL/GenBank/DDBJ databases. RL Biotechnology Centre, The University of the West Indies, Mona, Kingston, RL St, Andrew Kingston 7, Jamaica XX FH Key Location/Qualifiers FH FT source 1. .1367 FT /organism="Tomato yellow mosaic virus" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="Antigua and Barbuda:Sanderson" FT /clone="AN152" FT /db_xref="taxon:95525" FT CDS complement(7. .1080) FT /codon_start=1 FT /product="replication-associated protein" FT /protein_id="ADG27864.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNIETPTNKKYIKVC FT REFHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAGALNSGSKSEALNILKEKAPKDYILQFHNL FT NSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFA FT SINQGPTQDSQEETNKA" XX SQ Sequence 1367 BP; 351 A; 273 C; 292 G; 451 T; 0 other; gu320571 Length: 1367 02-JUN-2010 Type: N Check: 8464 .. 1 acacgcttac gccttattgg tttcttcttg gctatcttgt gttggacctt 51 gattgatact tgcgaacagt ggctcgtaga gggtgacgaa ggttgcattc 101 ttgagagccc aatttttcaa ggatatgttt ttttcttcgt ctagatattc 151 cctatatgag gaggtaggtc ctggattgca gaggaagata gtgggaattc 201 cccctttaat ttgaatgggc ttcccgtact ttgtgttgct ttgccagtcc 251 ctctgggccc ccatgaattc cttgaagtgc tttaaataat gcgggtctac 301 gtcatcaatg acgttgtacc acgcatcatt actgtacacc tttgggctta 351 ggtctagatg tccacataaa taattatgtg ggcctagaga cctggcccac 401 attgttttgc ctgttctgct atcaccctca atgacaatac ttatgggtct 451 ccatggccgc gcagcggaag acacgacgtt ctcggcgacc cactcttcaa 501 gttcatctgg aacttgatta aaagaagaag aaagaaatgg agaaacataa 551 acttctaaag gaggactaaa aatcctatct aaatttgaat ttaaattatg 601 aaattgtaaa atatagtcct ttggggcctt ttcttttaat atattgaggg 651 cctcggattt actgcctgaa ttgagtgctc cggcgtatgc gtcgttggca 701 gattgctgac ctcctctagc tgatctgcca tcgatttgga aaactccaaa 751 atcaatgaag tctccgtctt tctccacgta ggtcttgaca tctgttgagc 801 tcttagctgc ctgaatgttt ggatggaaat gtgctgacct gtttggggat 851 accaggtcga agaaccgttg gttcttacat tggtatttgc cttcgaattg 901 gataagcaca tggagatgtg gttccccatt ctcgtggaat tctctgcaaa 951 ctttgatgta ttttttattt gttggggttt ctatgttttt taattgggaa 1001 agtgcttcct ctttagagag agaacaattg ggatatgtta ggaaataatt 1051 cttggcatat attttaaata aacgaggcat gttgaaatga atcggtgtcc 1101 ctcaaagctc tatggcaatc ggtgtatcgg tgtcttacta atacctcgac 1151 acctaatggc aatttggtaa tttcataaat gttcattgca attcaaaatt 1201 caaaattcaa aaatcaaatc attaaagcgg tcatccgtat aatattaccg 1251 gatggccgcg ccttttcctt ttatgtggtc cccacgaggg ttacacagac 1301 gtcactgtca accaatcaaa ttgcatcctc aaacgttaga taagtgttta 1351 ttttccttta tatactt