Sequence of DPV Apple chlorotic leaf spot virus

Apple chlorotic leaf spot virus isolate PP27 coat protein gene, complete cds.

ACC No: GU327993

Dated: 2011-06-03 | Length: 582 | CRC: -477461426

                
ID   GU327993; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   GU327993;
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DT   24-FEB-2010 (Rel. 103, Created)
DT   03-JUN-2011 (Rel. 109, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate PP27 coat protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Trichovirus.
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RN   [1]
RP   1-582
RA   Song Y., Hong N., Wang L., Hu H., Tian R., Xu W., Ding F., Wang G.;
RT   "Molecular and serological diversity in Apple chlorotic leaf spot virus
RT   from sand pear (Pyrus pyrifolia) in China";
RL   Eur. J. Plant Pathol. 130(2):183-196(2011).
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RN   [2]
RP   1-582
RA   Song Y., Hong N., Wang G., Wang L.;
RT   ;
RL   Submitted (18-DEC-2009) to the INSDC.
RL   College of Plant Science and Technology, Huazhong Agricultural University,
RL   ShiZiShan No 1, Wuhan, Hubei 430070, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="pear"
FT                   /isolate="PP27"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Mar-2009"
FT                   /db_xref="taxon:12175"
FT   CDS             1. .582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D3XFJ7"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:D3XFJ7"
FT                   /protein_id="ADC80527.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLVAEGRPLHGKTGVILEQILESIFANI
FT                   AIQGTSEQTEFLDLMVEVKSMEDQKVIGSYNLKEIVNMIKAFKTTSSDPNINNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKLSSVSIDLCI"
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SQ   Sequence 582 BP; 180 A; 118 C; 148 G; 136 T; 0 other;

gu327993 Length: 582  03-JUN-2011  Type: N  Check: 7228  ..

       1  atggcagcag ttctgaatct gcagctaaag gtggacgccg atctgaaagc
      51  gttcctggtc gcagaaggca gaccccttca tggaaagaca ggggtaatcc
     101  tggaacagat actggagtcc atcttcgcga acatagcaat ccaggggacg
     151  tcggagcaga cagagtttct ggacctgatg gtggaggtga aatcaatgga
     201  ggaccagaag gtgatagggt catacaatct gaaggagata gtcaatatga
     251  tcaaagcctt caagactacc tcttcggatc cgaacatcaa caacatgacc
     301  ttccggcaag tatgtgaggc gtttgcaccc gaggcaagaa atgggttggt
     351  caagcttaag tataaagggg ttttcacaaa tctctttacg acaatgccag
     401  aggtgggtag caaataccca gagctaatgt ttgattttaa taagggcctc
     451  aacatgttca tcatgaacaa ggctcagcaa aaggtgataa ctaatatgaa
     501  ccgtcgtctt ttacagactg aatttgcaaa aagtgaaaat gaggcgaaac
     551  tctcgtctgt ctcaattgat ctttgcatct ag