Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate K30 coat protein gene, complete cds.

ACC No: GU350407

Dated: 2010-01-03 | Length: 672 | CRC: -844863500

                
ID   GU350407; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   GU350407;
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DT   03-JAN-2010 (Rel. 103, Created)
DT   03-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Citrus tristeza virus isolate K30 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Biswas K.K., Tarafdar A., Kumari S.;
RT   "Molecular characterization of Citrus tristeza virus from Darjeeling hills
RT   of northeastern Himalayan region of India";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Biswas K.K., Tarafdar A., Kumari S.;
RT   ;
RL   Submitted (30-NOV-2009) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Agricultural Research Institute, New
RL   Delhi, Delhi 110012, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus reticulata"
FT                   /isolate="K30"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Mangwa"
FT                   /collected_by="Kajal K. Biswas"
FT                   /collection_date="2007"
FT                   /identified_by="Kajal K. Biswas"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADA82227.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPSLSDKDKDFHIAMMLYRLAVKSSSLQGDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSRGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPVGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 189 A; 119 C; 179 G; 185 T; 0 other;

gu350407 Length: 672  03-JAN-2010  Type: N  Check: 6201  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga
      51  aggcgacgat gttgttgcag cagagtcttc tttcggttcc gtgaacttac
     101  acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgggaacc
     151  caacagaacg ccgctttgaa cagagatttg tttcttactc tgaaagggaa
     201  gtatcctagc ttgtctgaca aggataagga cttccacata gctatgatgt
     251  tatatcgttt agcggttaag agttcatcgt tgcaaggtga tgatgacacc
     301  acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa
     351  gctttggact gacgtcgtgt ttaattctag gggtattggt aaccgtacta
     401  atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc
     451  tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg
     501  gattccggtt ggatatcatt acctatgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg
     601  ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct
     651  tgggaaattt aacacacgtt ga