Sequence of DPV Homalodisca vitripennis reovirus
Homalodisca vitripennis reovirus isolate Bakersfield segment 7, complete sequence.
ACC No: GU362070
Dated: 2010-09-28 | Length: 1702 | CRC: -440857323
ID GU362070; SV 1; linear; genomic RNA; STD; VRL; 1702 BP. XX AC GU362070; XX DT 28-SEP-2010 (Rel. 106, Created) DT 28-SEP-2010 (Rel. 106, Last updated, Version 1) XX DE Homalodisca vitripennis reovirus isolate Bakersfield segment 7, complete DE sequence. XX KW . XX OS Homalodisca vitripennis reovirus OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus; OC unclassified Phytoreovirus. XX RN [1] RP 1-1702 RA Stenger D.C., Sisterson M.S., French R.; RT "Population genetics of Homalodisca vitripennis reovirus validates timing RT and limited introduction to California of its invasive insect host, the RT glassy-winged sharpshooter"; RL Virology 407(1):53-59(2010). XX RN [2] RP 1-1702 RA Stenger D.C.; RT ; RL Submitted (27-DEC-2009) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA XX CC GenBank Accession Numbers GU362064-GU362075 represent the complete CC genome of Homalodisca vitripennis reovirus Bakersfield isolate. XX FH Key Location/Qualifiers FH FT source 1. .1702 FT /organism="Homalodisca vitripennis reovirus" FT /segment="7" FT /host="Homalodisca vitripennis" FT /isolate="Bakersfield" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:411854" FT CDS 26. .1549 FT /codon_start=1 FT /product="minor core protein" FT /protein_id="ADN64763.1" FT /translation="MSAIVGVCLLSETTVLVRNLNDVVKGLYSRIRGNVTPPKESIEAR FT VSGQTVKVQRTIPINTVFIEYLDQDYISANPTMSAMEIIGSSGNTAPKTTFQSLLPSLS FT ALFGVAFIQGAFMHRVISTTGPTISFLVLVIGPPGNFTRKPSVAAASSVVQVESTSDID FT LNDTVKINALMLQNTKLVSASAIHATSLGEVSEKCDSLDTMIIMKALTYFKRYAYEQSL FT GTMDNATRVYLNLPIDEIFSGRTASGEQLQNKIATFKESRGHLAGVVLPDGHGKSTLVS FT DYPEIFTLLKDNNEATDPSDNGEIEANKSKGKYEGKIVLASSVKELFDNGIRVLGVLKL FT ESEAQVEDEINKDQVLKNKKDKIMEGWKNTSGPNVVTSKNLPLLHDKVMDIVTTHTKGI FT KTNRSGKPIEIKTDPKLRPETRISIYFKNGFPIARYSTNKLSKHGIDVVEAKDLNEDTI FT IVSNKPKNTPRRVPQNVKTKLESMRSNLKVDVDTDNLTEEEFIAKIKAL" XX SQ Sequence 1702 BP; 615 A; 276 C; 367 G; 444 T; 0 other; gu362070 Length: 1702 28-SEP-2010 Type: N Check: 1964 .. 1 ggcatacaac ggtaacgtgt gtatcatgtc tgcaattgtt ggagtatgct 51 tgctaagtga aacgacagtc ctagtgagaa atttaaatga tgtagttaaa 101 ggtttgtatt cacggattcg agggaatgtg acaccaccta aagaatctat 151 tgaagccaga gtttctggac aaaccgttaa agtgcaaaga acaataccaa 201 taaatacagt atttatagaa tatttagatc aagattatat aagcgcaaac 251 ccaacaatga gcgctatgga gataataggt agctcaggta atacggcacc 301 gaaaacgaca tttcaaagcc tgttaccatc actatctgca ttatttggag 351 tggcgttcat tcaaggcgca tttatgcata gagttatatc cacaacaggt 401 ccaacgatat catttttggt attagtaata ggtccaccag gaaatttcac 451 aagaaaacca agcgtagctg cagcatcgtc agtagttcaa gtggaatcga 501 catcagacat tgatctgaac gatacagtga aaataaatgc tctaatgctg 551 caaaatacaa aacttgtatc agcatcggca attcacgcaa cgtcgctggg 601 tgaagtgtca gaaaaatgcg atagtttgga taccatgata atcatgaaag 651 cattaacata ttttaaacgg tatgcatatg agcaaagtct tgggacgatg 701 gataatgcaa cgcgtgtgta tctaaatctg ccaattgacg agatattctc 751 agggagaacg gctagtggag aacaacttca aaacaaaata gcaacattca 801 aagaatctcg tggtcactta gctggggtag tgttaccaga cggacatggt 851 aaatcaactt tggtatctga ttatccagaa atatttacgc tgttaaaaga 901 caataatgaa gctactgacc catcggataa tggggaaatt gaggctaata 951 aatcaaaggg taagtatgaa ggtaaaatag tgctagctag tagtgtcaaa 1001 gaattgtttg acaatgggat tcgcgtgtta ggagtcctaa aacttgaatc 1051 tgaagctcaa gtggaggatg agataaataa agatcaagta cttaaaaata 1101 aaaaagataa gattatggag ggatggaaaa atacatccgg tccaaatgtt 1151 gtaactagta agaacttgcc tctattacat gacaaagtga tggatatagt 1201 cacaacgcat actaaaggaa ttaagacaaa caggtcaggg aagcctattg 1251 agataaagac tgatcccaag ctgagaccag agacaagaat cagtatttat 1301 ttcaaaaatg gttttccaat tgctagatat tcaactaata agctatcaaa 1351 gcacggtata gatgtagttg aggcaaagga tctaaatgag gacacaatta 1401 tagtgtcgaa taaacctaag aatactccaa ggagagtacc tcaaaacgtt 1451 aaaactaaac tcgaatcaat gcgatcgaat ttgaaggttg atgtcgatac 1501 tgacaactta actgaggagg aattcatcgc caagattaaa gcattatgac 1551 tattatttta cacttactca tcaatggtat atactaaggc gctgaggcgt 1601 agagtgtccg cccatttgag gaaggttcgt cagcgaagca agaaagttat 1651 gttcaatttg tagattatga tagtgcatcg agaacgttat cgttttaatg 1701 at