Sequence of DPV Homalodisca vitripennis reovirus
Homalodisca vitripennis reovirus isolate Bakersfield segment 8, complete sequence.
ACC No: GU362071
Dated: 2010-09-28 | Length: 1434 | CRC: 1543535966
ID GU362071; SV 1; linear; genomic RNA; STD; VRL; 1434 BP. XX AC GU362071; XX DT 28-SEP-2010 (Rel. 106, Created) DT 28-SEP-2010 (Rel. 106, Last updated, Version 1) XX DE Homalodisca vitripennis reovirus isolate Bakersfield segment 8, complete DE sequence. XX KW . XX OS Homalodisca vitripennis reovirus OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus; OC unclassified Phytoreovirus. XX RN [1] RP 1-1434 RA Stenger D.C., Sisterson M.S., French R.; RT "Population genetics of Homalodisca vitripennis reovirus validates timing RT and limited introduction to California of its invasive insect host, the RT glassy-winged sharpshooter"; RL Virology 407(1):53-59(2010). XX RN [2] RP 1-1434 RA Stenger D.C.; RT ; RL Submitted (27-DEC-2009) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA XX CC GenBank Accession Numbers GU362064-GU362075 represent the complete CC genome of Homalodisca vitripennis reovirus Bakersfield isolate. XX FH Key Location/Qualifiers FH FT source 1. .1434 FT /organism="Homalodisca vitripennis reovirus" FT /segment="8" FT /host="Homalodisca vitripennis" FT /isolate="Bakersfield" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2008" FT /db_xref="taxon:411854" FT CDS 22. .1281 FT /codon_start=1 FT /product="outer capsid protein" FT /protein_id="ADN64755.1" FT /translation="MSRQAWLDTSSLLEAISEYIGRCTYDTFNGFASGDSNALTNLLAQ FT LQIPTVGYMSDPKVPLQNMSNNFIEFMSTTDRCGFMLKKEWFSSDIQPVVSDDFIATYI FT KSRNQVPYADVLRQINYPALQASPDPKLIVRQSAVMRGSDTPYTTPIEPCDAYRSVAGG FT TGNIARMGLLATPPVQNDTFFVAERGRILFGIRSAAAVQGNQQIPIPPWASILQVTNAR FT LYFTDSFFGTSIAGVTATTVPGEAATNVVFPGDANDMVINSDDVVSLSLNGGNISVTLG FT VPRVGFCIAIDGNFTMLANRSQNYYTLTTAIAQNAHLDDFGLSAFLVPTMTALTNVGQA FT GIFSDAINALTTALITNYTTADVAAAIAFNSPWNRFSERMAVIMAAGGIADINVKRLII FT RHLWIITSLIAVFGRYYHPN" XX SQ Sequence 1434 BP; 408 A; 282 C; 331 G; 413 T; 0 other; gu362071 Length: 1434 28-SEP-2010 Type: N Check: 1913 .. 1 ggcaagagag agatctgaga catgtcccgt caagcgtggc tagatacaag 51 ttctttactc gaagctattt cggagtatat aggacgatgt acttacgata 101 ctttcaacgg attcgcttct ggcgattcca atgcattaac aaatttgttg 151 gcacaactac aaataccaac ggttgggtac atgtccgatc cgaaggtacc 201 acttcaaaat atgtctaata attttattga atttatgtct accactgata 251 gatgtggttt tatgcttaag aaagagtggt tctcgtctga tatacagccg 301 gtagtttcag atgactttat tgcgacatac ataaagtcaa gaaatcaagt 351 gccgtatgct gatgtattga ggcaaataaa ctatccggct ttacaagcat 401 cgccggatcc aaaattgata gttagacagt cggctgtgat gcgtggctct 451 gacacgccat ataccacccc aatcgaacca tgtgatgcat acagatccgt 501 tgctggtggc actggaaata tagctagaat gggattgctg gcaactccac 551 cagtccaaaa tgatactttc tttgtagctg aacgaggaag gatattgttt 601 ggtatacgat ccgcggctgc ggtgcaagga aaccagcaga taccaatacc 651 accatgggca tcaattttgc aagtaacaaa tgctagatta tattttacgg 701 atagtttttt cggtacttca atagctggtg tgactgctac aacagtacct 751 ggtgaggcgg cgactaatgt ggttttccca ggtgatgcta atgatatggt 801 aattaatagt gatgatgtag ttagcttgtc attaaatggc ggcaatatca 851 gtgtgactct aggtgttcca agggttggtt tttgcatagc aattgatggt 901 aattttacta tgctggccaa tagaagtcaa aattattata cgttaacaac 951 ggccattgcg caaaacgcgc atttagatga tttcgggtta tcggcatttt 1001 tggtgcctac gatgaccgcc ctaacgaacg ttgggcaagc gggcatattc 1051 agtgacgcaa tcaatgcttt aactactgca ttgattacaa actacacaac 1101 tgcagatgtc gcagctgcaa tagcatttaa ctctccttgg aatagatttt 1151 cagagcgtat ggccgtaatt atggcagcag gtggtattgc tgatatcaac 1201 gtcaaacgat tgatcatcag acatttatgg attattactt cattaatcgc 1251 cgtgttcggg cgatactatc atccgaatta aaagatatac tttgtaagcc 1301 cgctgaccct gtaccatcac gtaaggagcg agtaggaaat gacggactcc 1351 ccaagaatga tgggcggtga tgttctctag gttcctttag cggtgacaaa 1401 cgctactggc gctggtggtt aaactctcaa tgat