Sequence of DPV Homalodisca vitripennis reovirus
Homalodisca vitripennis reovirus isolate Mentone segment 4, complete sequence.
ACC No: GU369685
Dated: 2010-09-28 | Length: 2469 | CRC: -1367455910
ID GU369685; SV 1; linear; genomic RNA; STD; VRL; 2469 BP. XX AC GU369685; XX DT 28-SEP-2010 (Rel. 106, Created) DT 28-SEP-2010 (Rel. 106, Last updated, Version 1) XX DE Homalodisca vitripennis reovirus isolate Mentone segment 4, complete DE sequence. XX KW . XX OS Homalodisca vitripennis reovirus OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus; OC unclassified Phytoreovirus. XX RN [1] RP 1-2469 RA Stenger D.C., Sisterson M.S., French R.; RT "Population genetics of Homalodisca vitripennis reovirus validates timing RT and limited introduction to California of its invasive insect host, the RT glassy-winged sharpshooter"; RL Virology 407(1):53-59(2010). XX RN [2] RP 1-2469 RA Stenger D.C.; RT ; RL Submitted (29-DEC-2009) to the EMBL/GenBank/DDBJ databases. RL USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA XX CC GenBank Accession Numbers GU369682-GU369693 represent the complete CC genome of Homalodisca vitripennis reovirus Mentone isolate. XX FH Key Location/Qualifiers FH FT source 1. .2469 FT /organism="Homalodisca vitripennis reovirus" FT /segment="4" FT /host="Homalodisca vitripennis" FT /isolate="Mentone" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="2002" FT /db_xref="taxon:411854" FT CDS 62. .2311 FT /codon_start=1 FT /product="zinc finger protein" FT /protein_id="ADN64788.1" FT /translation="MEGALGIIASETGVNPSSKNLKKSQSSKDKQKFTSNIKQNQQSAV FT NSPDSGAWCDDQPLDIDSESSFPSLGQSSRTGPMRTRALDRTALARVRDCVHYSIEFPR FT NKWSNVTFATNSKSSIRYGLDAIRAMSENILTGKTEKIHVLLSSTEYQSIDQDFIGAWE FT RDEKIKIINYEVEDGAKFLSSSTSGVISVFSSIPNQMVSSSAMIIMHDLISLLKSESSI FT RDMVINALATHPSLLPGFSSINHKPGSVTFFEKHLELIDTHSAMHGVNPVNTMSYHLMS FT AKNNDGESAKCPIHPDVAFVALEPTTTKLSYFNKDGHTTGLYCRLTQPPKEDCIYCMSM FT KLAMSEGYPMTLKPSAPVQAQAILMSLVRLVMNIGYMRAGSIVPVEAARTTDHATVVNK FT ICDSINSHHNAARFGISTTTLSINNRPRRVISLCGRSEEQRSLINLIQFWFYGDLNEWG FT YNGMVLVSGNSEVMLFTSGLSDFSSHLVCAGISSKTWQTASGIDNLIEFKTVSKPMHNE FT YLIDVFESSLSKMFEQMVNARLPKDEKIRVTKNNGDARFNFKTLNPKKTYLAIKESFED FT SDCVGDALFRAMIALSSHPALSKCRDITDFSTSFAIKMKLKPMTEDMKAERKKLSNTKS FT LVKKGGSGQSSLPITVNECPVAILSNSFSLNLAKLRELKEKHEGVCEEIKPKMDAKAVS FT ESVEAKMEEYFKPKPISSYLESDESQEDASEREQKEDGEEEEVKKEEENSPQVVE" XX SQ Sequence 2469 BP; 814 A; 433 C; 554 G; 668 T; 0 other; gu369685 Length: 2469 28-SEP-2010 Type: N Check: 4689 .. 1 ggcattttct gctacttaga cgaaatctat ttaacaatcg tgtaatatta 51 tttagtctgg tatggaaggg gcacttggaa ttatcgcgtc tgaaaccggg 101 gtgaacccgt cttctaaaaa tttgaagaaa agtcagagtt ctaaagataa 151 acaaaaattc acatctaaca ttaaacaaaa tcagcagtcg gcagtaaact 201 caccggatag tggagcatgg tgcgatgacc aaccgctgga tattgattct 251 gaatcatcat ttccatcact tggtcagtca tcaagaactg gtccgatgcg 301 gacgagagca ttggatagaa cggcgctcgc cagggttaga gattgtgtgc 351 actactcaat tgagtttcca cgtaacaaat ggagtaatgt cacatttgct 401 acaaatagca aatcatctat ccgttatggt ttggatgcta ttcgtgccat 451 gtcagagaac atattgactg gtaagacaga aaagatccac gtcttattgt 501 catcaactga gtatcaatct attgatcagg atttcattgg agcatgggag 551 cgtgatgaaa aaataaaaat tataaattat gaggtcgagg atggagctaa 601 attcttatca tcatcgacaa gcggtgtcat atcggtgttt agctcaatac 651 ctaatcaaat ggtttcttca tctgctatga ttataatgca tgatttgata 701 tcactattaa aatctgagtc aagtatcagg gatatggtaa ttaatgcatt 751 ggcaacgcac ccatcgctac tccctgggtt tagttccatc aatcacaaac 801 ctggatctgt gacattcttt gagaagcatt tagagttgat agatactcat 851 agtgcaatgc atggagttaa tcctgtaaac acaatgagtt accatctgat 901 gtcggcaaag aacaatgatg gtgagtcggc aaaatgccca attcatccgg 951 atgttgcgtt cgttgcgcta gaaccaacaa caacaaaatt atcttatttt 1001 aataaagatg ggcacacaac tgggttatac tgtaggttaa ctcagcctcc 1051 aaaggaagac tgcatttatt gtatgtcaat gaaactggcg atgtctgaag 1101 gttacccaat gacgttgaaa ccatcagctc cagttcaggc acaggcgata 1151 ttgatgtcac ttgtcaggct ggtaatgaat attggctaca tgcgggcagg 1201 atcgatagtt cccgttgaag ctgcgagaac tacagatcat gcaacagtcg 1251 tgaacaaaat ctgtgacagt atcaattctc atcataatgc tgccagattt 1301 gggatttcaa caacaacatt gtctataaac aataggccta gacgtgtgat 1351 atcgctgtgt ggtagaagtg aagagcaacg cagtttgata aatttgattc 1401 aattttggtt ctatggtgat ctaaatgaat gggggtacaa tggtatggtc 1451 ttagtgtcag ggaattcaga ggtgatgttg ttcacgtctg gattaagtga 1501 tttctcatca catcttgtat gcgcaggcat atcttcaaag acatggcaaa 1551 ctgcttctgg cattgacaat ttgattgaat ttaaaacggt ttctaaacca 1601 atgcacaatg agtatctgat cgacgtcttc gaatccagcc tgtcaaagat 1651 gttcgaacag atggtcaatg caagactgcc aaaagatgag aaaatcaggg 1701 tcacaaagaa caatggtgat gcaagattca acttcaagac cctaaatcca 1751 aagaagacgt atttagcaat taaagaaagt tttgaggatt ctgattgtgt 1801 tggagacgca ctgtttagag cgatgattgc tctatcctca catccagctc 1851 tatcaaagtg cagggatatt acagatttct caacttcgtt cgcgataaag 1901 atgaaattga agccaatgac agaggacatg aaggccgaac gaaagaagct 1951 atcgaatacc aagtcgctag tcaagaaagg cggtagtgga caatcatcac 2001 taccgataac ggtaaatgaa tgtccagtcg ccatattgtc aaacagcttt 2051 tcattgaatc tagctaaatt gcgagagttg aaagaaaagc acgaaggcgt 2101 gtgtgaagag attaaaccta agatggacgc taaagctgtt tcagaaagcg 2151 tggaggcaaa gatggaagaa tatttcaagc caaagcctat ctcatcatat 2201 cttgagagtg atgaaagtca agaagacgct agtgagcggg agcaaaaaga 2251 agatggggaa gaggaagaag taaagaaaga ggaggaaaac tcaccccaag 2301 tagttgaata aggaagttag agcaaataca gacgtgctgt atatatgtaa 2351 ttagtgtaaa atatacgtta tatagaatag ttttatatca tatgatggtg 2401 gtagtagttt agagttactc tgcttagaat acatgactac ctcaatttac 2451 acgacagcag agtaacgat