Sequence of DPV Cotton leaf curl virus-?
Cotton leaf curl virus isolate Lucknow movement/precoat protein (AV2) gene, partial cds; coat protein (AV1) gene, complete cds; and replication enhancer protein gene, partial cds.
ACC No: GU385766
Dated: 2010-10-28 | Length: 854 | CRC: -159134144
ID GU385766; SV 1; linear; genomic DNA; STD; VRL; 854 BP.
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AC GU385766;
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DT 01-MAR-2010 (Rel. 104, Created)
DT 28-OCT-2010 (Rel. 106, Last updated, Version 2)
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DE Cotton leaf curl virus isolate Lucknow movement/precoat protein (AV2) gene,
DE partial cds; coat protein (AV1) gene, complete cds; and replication
DE enhancer protein gene, partial cds.
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KW .
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OS Cotton leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-854
RX PUBMED; 20890652.
RA Kumar A., Kumar J., Khan Z.A., Yadav N., Sinha V., Bhatnagar D., Khan J.A.;
RT "Study of betasatellite molecule from leaf curl disease of sunn hemp
RT (Crotalaria juncea) in India";
RL Virus Genes 41(3):432-440(2010).
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RN [2]
RP 1-854
RA Kumar A., Kumar J., Khan J.A.;
RT ;
RL Submitted (05-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL Marg, Lucknow, Uttar Pradesh 226001, India
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FH Key Location/Qualifiers
FH
FT source 1. .854
FT /organism="Cotton leaf curl virus"
FT /host="Crotalaria juncea"
FT /isolate="Lucknow"
FT /mol_type="genomic DNA"
FT /country="India"
FT /isolation_source="leaf tissue"
FT /collection_date="Sep-2008"
FT /db_xref="taxon:53010"
FT gene <1. .230
FT /gene="AV2"
FT CDS <1. .230
FT /codon_start=3
FT /gene="AV2"
FT /product="movement/precoat protein"
FT /db_xref="GOA:D3Y1K4"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:D3Y1K4"
FT /protein_id="ADC93764.1"
FT /translation="DLISVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPH
FT CPRHQSKSMGEQAHEQKAQDVQDVQKSRCS"
FT gene 34. .807
FT /gene="AV1"
FT CDS 34. .804
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /note="involved in encapsidation"
FT /db_xref="GOA:D3Y1K5"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:D3Y1K5"
FT /protein_id="ADC93763.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(801. .>854)
FT /codon_start=1
FT /product="replication enhancer protein"
FT /db_xref="UniProtKB/TrEMBL:D3Y1K6"
FT /protein_id="ADC93765.1"
FT /translation="EHVVYVDQSSSIKFNIY"
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SQ Sequence 854 BP; 249 A; 151 C; 209 G; 245 T; 0 other;
gu385766 Length: 854 28-OCT-2010 Type: N Check: 962 ..
1 gggatttgat ttcagtaata agggccagga attatgtcga agcgaccagc
51 agatataatc atttccacgc ccgcttcgaa ggtacgccgc cgtctcaact
101 tcgacagccc atatgtgagc cgtgctgctg cccccattgt ccgcgtcacc
151 aaagcaaaag catgggcgaa caggcccatg aacagaaagc ccaggatgta
201 caggatgtac agaagtccag atgttcctag aggatgtgaa ggtccatgta
251 aggttcagtc gtttgagtcc agacatgata ttcagcatat aggtaaagtc
301 atgtgtgtta gtgatgttac tcgtggtact gggcttaccc atagagttgg
351 taagagattt tgtgttaagt ctgtgtatgt tttgggtaag atatggatgg
401 atgagaacat taagaccaag aatcacacga atagtgtgat gtttttctta
451 gttagagatc gtagacctgt tgataaacct caagattttg gagaggtatt
501 taacatgttt gataatgagc ccagtacggc gactgtgaag aatgttcatc
551 gtgataggta tcaagtgctg cgcaaatggt atgcaactgt caccggtgga
601 caatacgctt caaaggaaca agctcttgtg aagaagttta ttagggttaa
651 taattatgtt gtgtataacc agcaggaagc tggtaagtat gagaatcatt
701 ctgagaacgc tttaatgttg tatatggcgt gtactcacgc ctctaaccca
751 gtgtatgcta ctttgaagat acggatctac ttctatgatt ccgtgacaaa
801 ttaataaata ttgaatttta ttgaagatga ttggtctaca tatacaacat
851 gctc