Sequence of DPV Pepper golden mosaic virus
Pepper golden mosaic virus isolate SLP1 segment DNA-B, complete sequence.
ACC No: GU564595
Dated: 2010-04-01 | Length: 2597 | CRC: 514413482
ID GU564595; SV 1; circular; genomic DNA; STD; VRL; 2597 BP.
XX
AC GU564595;
XX
DT 01-APR-2010 (Rel. 104, Created)
DT 01-APR-2010 (Rel. 104, Last updated, Version 1)
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DE Pepper golden mosaic virus isolate SLP1 segment DNA-B, complete sequence.
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KW .
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OS Pepper golden mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2597
RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K.,
RA Cardenas-Conejo Y., Arguello-Astorga G.R.;
RT "Characterization of begomoviruses from San Luis Potosi, Mexico by a
RT lineage-specific overlapping PCR method";
RL Unpublished.
XX
RN [2]
RP 1-2597
RA Ambriz-Granados S., Monreal-Vargas C.T., Rodriguez-Milan K.,
RA Cardenas-Conejo Y., Arguello-Astorga G.R.;
RT ;
RL Submitted (24-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL Molecular Biology, Instituto Potosino de Investigacion Cientifica y
RL Tecnologica, Camino a la Presa San Jose 2055, San Luis Potosi, SLP 78216,
RL Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .2597
FT /organism="Pepper golden mosaic virus"
FT /segment="DNA-B"
FT /host="Capsicum annuum"
FT /isolate="SLP1"
FT /mol_type="genomic DNA"
FT /country="Mexico"
FT /collection_date="2009"
FT /db_xref="taxon:223301"
FT gene 401. .1171
FT /gene="bv1"
FT CDS 401. .1171
FT /codon_start=1
FT /gene="bv1"
FT /product="nuclear shuttle protein"
FT /note="BV1; BR1; NSP"
FT /protein_id="ADD92375.1"
FT /translation="MYQSRYARVAPYVQRRFQRRNQVFKRTASGRRNDAKRRSSQLIKS
FT NEDPKITSQRIHENQYGPEFVMSHNAAISTFINYPVLGKSQPNRSRSYIKLKRLSFKGT
FT VKIERVHADVNMDGLCPKIEGVFSLVIVVDRKPHLSSSGALHTFDELFGARIHSHGNLA
FT ITAALKDRYYVRHVLKRVLSVEKDTVMVDIEGCTSLSNKRFNCWSTFKDLEHDTCNGVY
FT GNISKNAILVYYCWMSDVMSKASTFVSYDLDYVG"
FT gene complement(1230. .2099)
FT /gene="bc1"
FT CDS complement(1230. .2099)
FT /codon_start=1
FT /gene="bc1"
FT /product="movement protein"
FT /note="BC1; BL1; MP"
FT /protein_id="ADD92376.1"
FT /translation="MEAGLASAPSAFNYLESHRDEYQLSHDLTEIVLQFPSTASQLTAR
FT LSRSCMKIDHCVIEYRQQVPINASGSVIVEIHDQRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWRLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFSHNDVDFSHVDYGQWERKVLRSNSMTRVGLTGPIELRPGESWASRCTVGTSGPSRD
FT SEMHPYRELQQLGPSVLDPGDSASQVGLQRAQSNITMSMAQLNELVRTTVHECISNNCN
FT PAQPKSLQ"
XX
SQ Sequence 2597 BP; 739 A; 519 C; 594 G; 745 T; 0 other;
gu564595 Length: 2597 01-APR-2010 Type: N Check: 5809 ..
1 actggatggc cgcgattttt ttggagtcct gccagcctgg accgcattat
51 tttgggactc cgggcacttt tcccaaggaa ttggcccact acatcccatt
101 atccgggacc actacaactg gaggctgttc ttttactgga gatcaatctg
151 gaccgttggc gaaacctaat cgcgcacgtt cgtttgaatt ttgatttatt
201 ggcgcgatta ccaataaatg gaccatgtgt ataacagttt tgatgttgac
251 atatttgtaa ttgagcagta catggtccag taaaaactca agtgtggagt
301 tatgtaattt gaaatgataa tcgtgttgac tatttaatgg acttgagttt
351 taatacatga aatcgtcagg taaggattaa acatctacat tgtccctaat
401 atgtatcagt caagatatgc acgtgtggca ccatatgttc agagacgatt
451 tcaacgacgt aatcaagtgt ttaagcgcac agcatctggg agacgtaatg
501 atgccaaacg tcgatcaagt caattaatta agagtaatga ggatcctaag
551 attacgtcgc aacgcataca tgagaaccaa tatgggcctg agttcgttat
601 gtcgcataat gccgcaattt ccacgttcat taattatcct gtacttggta
651 agagtcaacc caaccgaagt aggtcttaca ttaagcttaa acgtctgtcg
701 ttcaagggaa cagtaaaaat tgagcgtgtg catgcggatg tgaacatgga
751 cgggttatgt cctaaaattg aaggggtgtt ctccctggtt atcgtggtgg
801 atcgtaaacc tcatttaagt tcgtctggcg cattgcatac attcgacgaa
851 ctatttgggg caagaatcca cagccatggg aacttagcca ttacagcagc
901 attgaaagat cgttattacg tccgtcatgt attgaagcgc gttctatcag
951 ttgagaagga cactgtcatg gtagacatcg aaggatgcac atccctttct
1001 aacaagcgct tcaactgctg gtctacattt aaggatttag aacatgacac
1051 atgtaacggt gtttatggca atataagcaa gaatgccata ttagtgtact
1101 actgctggat gtcggatgtc atgtctaaag catccacatt tgtatcatat
1151 gacctagact atgtaggttg attcataata aaataatgga agtgtttcac
1201 attttgaaca ttcaataaaa gagacatttt tattgcaaag acttcggctg
1251 tgccgggtta caattattgc taatacattc gtgaaccgta gtcctaacca
1301 gctcgttcaa ttgggccatt gacattgtta tattggattg ggctcgttgt
1351 agcccaacct gtgatgcgga atcacctggg tctaatacac ttgggcccaa
1401 ttgttgaagc tctctatacg ggtgcatctc cgaatccctt gaaggcccac
1451 ttgtacccac agtacaccta gaagcccatg actcacctgg cctcaattca
1501 attgggcctg ttagcccaac cctagtcatt gaattggacc gtaatacctt
1551 ccgctcccac tggccatagt ccacatggga gaagtccaca tcgttgtggg
1601 agaactgttt agatagtatt ttgacagtgg gagcccggaa tggtatatct
1651 accgagtgct tagctgtgga cagtttgagt ttgcctttga acttggcaaa
1701 atgagtcctt tgatgtacat ttgtatcgga cactcggtag tataatctcc
1751 atggaatggg gtccttcagt gaaaagaatg acgacgagaa gtaatggaga
1801 tctatgttgc accttattgg aaatgtccac gacgcctgta atgactcgtt
1851 atccgtcatt ctttggtcat gaatctccac aatgaccgac ccagaagcgt
1901 taataggaac ttgctgtcta tattctatga cgcagtggtc aatcttcata
1951 cagctgcgac ttagtcgtgc cgttagctgt gatgctgtgg aagggaactg
2001 aaggactatc tcagtcagat catgcgatag ctggtattca tctcgatgag
2051 attcaagata attaaaggcg ctaggagcac tcgccaaccc cgcttccata
2101 tctgaaaata tggctgcgca gcagaagtgt ttcgcgaata agaggatgtt
2151 gctatcaagt tcgatggtgt gtctacaggt ttacaaagac gaaacactta
2201 cgctggtcgt tgctgaagtt ctgccaaaga atatatgaat tgttaaagga
2251 agtctgcgtt agcagctgag taatatggga agctatggca acaaccaata
2301 aagctcaaag tgatatgaag aggatcagga attgcattta atgttgaaat
2351 gttcatcggc gcaattgcaa tgagaagccg tctcaacaag ccattatata
2401 gacttaacat atgagggtga gtttaagaat tgtgaactag ttgagaagaa
2451 tgtcaaatat gtaaataccg tataggactc caggagagtc cctcaacttc
2501 tgtcatatat tgtggagtcc tggagtccct tatatactag aactctctag
2551 gaagctaaga gctgaggtgt cctaatcgcg gccatccata taatatt