Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Linstead 2 coat protein gene, complete cds.
ACC No: GU983386
Dated: 2011-04-01 | Length: 672 | CRC: 806485458
ID GU983386; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC GU983386; XX DT 01-APR-2011 (Rel. 108, Created) DT 01-APR-2011 (Rel. 108, Last updated, Version 1) XX DE Citrus tristeza virus isolate Linstead 2 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT "Molecular characterization of the coat protein gene of some biological RT Jamaican Citrus tristeza virus isolates"; RL Unpublished. XX RN [2] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT ; RL Submitted (07-MAR-2010) to the EMBL/GenBank/DDBJ databases. RL Life Sciences, University of the West Indies, 2 St. John's Close, Kingston RL 7, Jamaica XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Mexican lime" FT /strain="Mild" FT /isolate="Linstead 2" FT /mol_type="genomic RNA" FT /country="Jamaica" FT /collection_date="Mar-2007" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADZ54793.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDARIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 198 A; 121 C; 169 G; 184 T; 0 other; gu983386 Length: 672 01-APR-2011 Type: N Check: 3599 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgatt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggtataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcacg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattt aacacacgtt ga